Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
EFCC1Q9HA90 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
EFCC1Q9HA90 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.41■□□□□ 0.54
EFCC1Q9HA90 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EFCC1Q9HA90 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EFCC1Q9HA90 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EFCC1Q9HA90 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
EFCC1Q9HA90 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.41■□□□□ 0.54
EFCC1Q9HA90 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EFCC1Q9HA90 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EFCC1Q9HA90 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 AC079328.1-201ENST00000560358 952 ntBASIC18.4■□□□□ 0.54
EFCC1Q9HA90 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 AL022328.3-201ENST00000607943 679 ntBASIC18.4■□□□□ 0.54
EFCC1Q9HA90 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EFCC1Q9HA90 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
EFCC1Q9HA90 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
EFCC1Q9HA90 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
EFCC1Q9HA90 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 Z97205.2-201ENST00000564697 1639 ntBASIC18.39■□□□□ 0.53
EFCC1Q9HA90 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 FTH1P14-201ENST00000482930 551 ntBASIC18.39■□□□□ 0.53
EFCC1Q9HA90 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 LINC01144-201ENST00000626198 1710 ntBASIC18.39■□□□□ 0.53
EFCC1Q9HA90 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EFCC1Q9HA90 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
EFCC1Q9HA90 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.38■□□□□ 0.53
EFCC1Q9HA90 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
EFCC1Q9HA90 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.38■□□□□ 0.53
EFCC1Q9HA90 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EFCC1Q9HA90 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
EFCC1Q9HA90 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
EFCC1Q9HA90 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EFCC1Q9HA90 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.38■□□□□ 0.53
EFCC1Q9HA90 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
EFCC1Q9HA90 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EFCC1Q9HA90 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.38■□□□□ 0.53
EFCC1Q9HA90 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms