Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 RNMTL1P1-201ENST00000454103 560 ntBASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 BNIP3P13-201ENST00000599968 566 ntBASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 AC068587.8-201ENST00000641239 219 ntBASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 DPM3-202ENST00000368399 517 ntBASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 OARD1-204ENST00000464633 717 ntTSL 2 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK3Q9BYB0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 SLC16A6P1-201ENST00000413214 1059 ntBASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 FTLP1-201ENST00000449155 526 ntBASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 PCDHA12-202ENST00000613593 2588 ntBASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHANK3Q9BYB0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 AC112504.1-201ENST00000623415 1841 ntBASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHANK3Q9BYB0 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHANK3Q9BYB0 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC19.9■□□□□ 0.78
SHANK3Q9BYB0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHANK3Q9BYB0 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHANK3Q9BYB0 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC19.9■□□□□ 0.78
SHANK3Q9BYB0 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.9■□□□□ 0.78
SHANK3Q9BYB0 KRT18P66-201ENST00000452970 1269 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms