Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
VGLL1Q99990 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
VGLL1Q99990 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
VGLL1Q99990 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.06□□□□□ -0.48
VGLL1Q99990 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
VGLL1Q99990 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.06□□□□□ -0.48
VGLL1Q99990 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.06□□□□□ -0.48
VGLL1Q99990 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.06□□□□□ -0.48
VGLL1Q99990 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
VGLL1Q99990 AC140658.5-201ENST00000438532 169 ntBASIC12.06□□□□□ -0.48
VGLL1Q99990 PRYP6-201ENST00000514804 343 ntBASIC12.06□□□□□ -0.48
VGLL1Q99990 RNA5SP415-201ENST00000517246 115 ntBASIC12.06□□□□□ -0.48
VGLL1Q99990 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.06□□□□□ -0.48
VGLL1Q99990 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
VGLL1Q99990 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.06□□□□□ -0.48
VGLL1Q99990 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
VGLL1Q99990 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.06□□□□□ -0.48
VGLL1Q99990 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.06□□□□□ -0.48
VGLL1Q99990 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.06□□□□□ -0.48
VGLL1Q99990 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.06□□□□□ -0.48
VGLL1Q99990 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.06□□□□□ -0.48
VGLL1Q99990 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.06□□□□□ -0.48
VGLL1Q99990 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
VGLL1Q99990 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.06□□□□□ -0.48
VGLL1Q99990 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
VGLL1Q99990 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VGLL1Q99990 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
VGLL1Q99990 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.05□□□□□ -0.48
VGLL1Q99990 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
VGLL1Q99990 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.05□□□□□ -0.48
VGLL1Q99990 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
VGLL1Q99990 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.05□□□□□ -0.48
VGLL1Q99990 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.05□□□□□ -0.48
VGLL1Q99990 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.05□□□□□ -0.48
VGLL1Q99990 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
VGLL1Q99990 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.05□□□□□ -0.48
VGLL1Q99990 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.05□□□□□ -0.48
VGLL1Q99990 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 RN7SL510P-201ENST00000581311 263 ntBASIC12.05□□□□□ -0.48
VGLL1Q99990 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.05□□□□□ -0.48
VGLL1Q99990 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
VGLL1Q99990 AL031008.1-201ENST00000619963 541 ntBASIC12.05□□□□□ -0.48
VGLL1Q99990 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
VGLL1Q99990 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
VGLL1Q99990 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 AC009090.5-201ENST00000624886 2285 ntBASIC12.05□□□□□ -0.48
VGLL1Q99990 AC091951.1-201ENST00000512854 2465 ntBASIC12.05□□□□□ -0.48
VGLL1Q99990 AC018892.3-201ENST00000623986 2499 ntBASIC12.05□□□□□ -0.48
VGLL1Q99990 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms