Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 DUSP5P1-201ENST00000441325 1139 ntBASIC12.88□□□□□ -0.35
RAB40CQ96S21 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 AC008608.2-201ENST00000606089 416 ntBASIC12.88□□□□□ -0.35
RAB40CQ96S21 REXO1L6P-202ENST00000619970 1078 ntBASIC12.88□□□□□ -0.35
RAB40CQ96S21 AC107918.4-202ENST00000641623 219 ntBASIC12.88□□□□□ -0.35
RAB40CQ96S21 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 AC126335.2-201ENST00000623362 4637 ntBASIC12.88□□□□□ -0.35
RAB40CQ96S21 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.88□□□□□ -0.35
RAB40CQ96S21 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 AC127383.1-201ENST00000444697 1800 ntBASIC12.88□□□□□ -0.35
RAB40CQ96S21 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB40CQ96S21 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB40CQ96S21 AC007686.3-201ENST00000619017 3487 ntBASIC12.87□□□□□ -0.35
RAB40CQ96S21 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 MRPL20P1-201ENST00000400819 433 ntBASIC12.87□□□□□ -0.35
RAB40CQ96S21 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 FAM185BP-201ENST00000443595 716 ntBASIC12.87□□□□□ -0.35
RAB40CQ96S21 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 IGHV3-65-201ENST00000523210 341 ntBASIC12.87□□□□□ -0.35
RAB40CQ96S21 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 AL031432.2-201ENST00000566714 459 ntBASIC12.87□□□□□ -0.35
RAB40CQ96S21 AL928711.1-201ENST00000570165 459 ntBASIC12.87□□□□□ -0.35
RAB40CQ96S21 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 AC025062.2-201ENST00000605477 670 ntBASIC12.87□□□□□ -0.35
RAB40CQ96S21 IFNL4P1-201ENST00000607083 540 ntBASIC12.87□□□□□ -0.35
RAB40CQ96S21 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 AC009090.5-201ENST00000624886 2285 ntBASIC12.87□□□□□ -0.35
RAB40CQ96S21 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 AL589702.1-201ENST00000641229 1509 ntBASIC12.87□□□□□ -0.35
RAB40CQ96S21 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms