Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 HBZP1-201ENST00000354915 429 ntBASIC14.96□□□□□ -0.01
NR1H4Q96RI1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 MIR662-201ENST00000384847 95 ntBASIC14.96□□□□□ -0.01
NR1H4Q96RI1 HOMER2P1-201ENST00000455653 964 ntBASIC14.96□□□□□ -0.01
NR1H4Q96RI1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 VENTXP5-201ENST00000523979 775 ntBASIC14.96□□□□□ -0.01
NR1H4Q96RI1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 AC073508.3-201ENST00000619697 1419 ntBASIC14.96□□□□□ -0.01
NR1H4Q96RI1 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H4Q96RI1 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
NR1H4Q96RI1 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
NR1H4Q96RI1 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
NR1H4Q96RI1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NR1H4Q96RI1 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NR1H4Q96RI1 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
NR1H4Q96RI1 AC011474.4-201ENST00000623523 2076 ntBASIC14.96□□□□□ -0.02
NR1H4Q96RI1 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NR1H4Q96RI1 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NR1H4Q96RI1 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
NR1H4Q96RI1 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
NR1H4Q96RI1 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NR1H4Q96RI1 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 AC118758.2-201ENST00000614242 2813 ntBASIC14.95□□□□□ -0.02
NR1H4Q96RI1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 Z83836.1-201ENST00000624605 1642 ntBASIC14.95□□□□□ -0.02
NR1H4Q96RI1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 U82695.1-201ENST00000635752 1889 ntBASIC14.95□□□□□ -0.02
NR1H4Q96RI1 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NR1H4Q96RI1 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.94□□□□□ -0.02
NR1H4Q96RI1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 AC067750.1-201ENST00000608826 6545 ntBASIC14.94□□□□□ -0.02
NR1H4Q96RI1 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.94□□□□□ -0.02
NR1H4Q96RI1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms