Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 AC007541.1-201ENST00000570282 1469 ntBASIC15.79■□□□□ 0.12
CHD5Q8TDI0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD5Q8TDI0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 GIMAP3P-201ENST00000495150 836 ntBASIC15.78■□□□□ 0.12
CHD5Q8TDI0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 C18orf15-201ENST00000623680 2534 ntBASIC15.78■□□□□ 0.12
CHD5Q8TDI0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 KRT8P44-201ENST00000441609 1350 ntBASIC15.78■□□□□ 0.12
CHD5Q8TDI0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD5Q8TDI0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 AC004066.1-201ENST00000502488 802 ntBASIC15.77■□□□□ 0.12
CHD5Q8TDI0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 AC126365.1-201ENST00000578585 1514 ntBASIC15.77■□□□□ 0.12
CHD5Q8TDI0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHD5Q8TDI0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD5Q8TDI0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD5Q8TDI0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CHD5Q8TDI0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD5Q8TDI0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CHD5Q8TDI0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.77■□□□□ 0.11
CHD5Q8TDI0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CHD5Q8TDI0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD5Q8TDI0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD5Q8TDI0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.77■□□□□ 0.11
CHD5Q8TDI0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms