Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 Z92544.3-201ENST00000624747 417 ntBASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC116Q8IYX3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 AP002414.2-201ENST00000591780 3365 ntBASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 SPDYE17-201ENST00000412399 783 ntBASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 AC025678.2-201ENST00000562061 970 ntBASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 AL589739.1-201ENST00000607720 493 ntBASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 AC020658.6-201ENST00000623564 1870 ntBASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 AC092384.3-202ENST00000564646 2873 ntBASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 SSR4P1-203ENST00000599569 2260 ntBASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC116Q8IYX3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 AC105250.1-201ENST00000509378 2057 ntBASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 MTND4LP12-201ENST00000448237 295 ntBASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 AL079307.3-201ENST00000556114 283 ntBASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 KRT8P12-202ENST00000472924 1397 ntBASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms