Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
LINC00346Q8IVM7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 AC023824.1-201ENST00000562945 2975 ntBASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 PCDHA3-202ENST00000532566 4594 ntBASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 AC138035.3-201ENST00000622706 2791 ntBASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 KRT18P32-201ENST00000424695 1287 ntBASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 DNAJB3-201ENST00000446806 729 ntBASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 AC010327.4-202ENST00000591484 748 ntBASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00346Q8IVM7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 AL450472.2-201ENST00000603663 1156 ntBASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 KRT8P37-201ENST00000451609 1420 ntBASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms