Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC233724.13-201ENST00000598383 410 ntBASIC16.7■□□□□ 0.26
VARS2Q5ST30 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
VARS2Q5ST30 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
VARS2Q5ST30 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 AC022762.2-201ENST00000600308 1353 ntBASIC16.69■□□□□ 0.26
VARS2Q5ST30 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 AL118508.1-201ENST00000613502 2345 ntBASIC16.69■□□□□ 0.26
VARS2Q5ST30 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.69■□□□□ 0.26
VARS2Q5ST30 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VARS2Q5ST30 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VARS2Q5ST30 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VARS2Q5ST30 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARS2Q5ST30 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VARS2Q5ST30 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARS2Q5ST30 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARS2Q5ST30 AC006449.5-201ENST00000610658 2098 ntBASIC16.68■□□□□ 0.26
VARS2Q5ST30 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.68■□□□□ 0.26
VARS2Q5ST30 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARS2Q5ST30 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VARS2Q5ST30 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARS2Q5ST30 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARS2Q5ST30 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARS2Q5ST30 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.68■□□□□ 0.26
VARS2Q5ST30 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARS2Q5ST30 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARS2Q5ST30 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VARS2Q5ST30 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VARS2Q5ST30 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms