Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC109635.5-201ENST00000533593 962 ntBASIC12.2□□□□□ -0.46
HIST1H1AQ02539 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 AL078644.1-201ENST00000609881 752 ntBASIC12.2□□□□□ -0.46
HIST1H1AQ02539 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 AC004877.2-201ENST00000623941 599 ntBASIC12.2□□□□□ -0.46
HIST1H1AQ02539 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1AQ02539 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 AC087386.2-201ENST00000623212 4637 ntBASIC12.19□□□□□ -0.46
HIST1H1AQ02539 AC067750.1-201ENST00000608826 6545 ntBASIC12.19□□□□□ -0.46
HIST1H1AQ02539 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.19□□□□□ -0.46
HIST1H1AQ02539 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H1AQ02539 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H1AQ02539 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms