Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TPM4P67936 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.79■□□□□ 0.44
TPM4P67936 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM4P67936 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TPM4P67936 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TPM4P67936 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM4P67936 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.79■□□□□ 0.44
TPM4P67936 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TPM4P67936 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TPM4P67936 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TPM4P67936 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TPM4P67936 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.79■□□□□ 0.44
TPM4P67936 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
TPM4P67936 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TPM4P67936 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.79■□□□□ 0.44
TPM4P67936 AC243562.2-201ENST00000561247 970 ntBASIC17.79■□□□□ 0.44
TPM4P67936 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.79■□□□□ 0.44
TPM4P67936 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.79■□□□□ 0.44
TPM4P67936 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
TPM4P67936 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TPM4P67936 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TPM4P67936 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM4P67936 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM4P67936 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM4P67936 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM4P67936 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.79■□□□□ 0.44
TPM4P67936 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM4P67936 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.79■□□□□ 0.44
TPM4P67936 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM4P67936 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.78■□□□□ 0.44
TPM4P67936 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.78■□□□□ 0.44
TPM4P67936 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TPM4P67936 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TPM4P67936 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.78■□□□□ 0.44
TPM4P67936 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.78■□□□□ 0.44
TPM4P67936 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.78■□□□□ 0.44
TPM4P67936 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TPM4P67936 AC126335.2-201ENST00000623362 4637 ntBASIC17.78■□□□□ 0.44
TPM4P67936 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TPM4P67936 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TPM4P67936 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.78■□□□□ 0.44
TPM4P67936 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.78■□□□□ 0.44
TPM4P67936 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.78■□□□□ 0.44
TPM4P67936 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.78■□□□□ 0.44
TPM4P67936 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.78■□□□□ 0.44
TPM4P67936 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TPM4P67936 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.78■□□□□ 0.44
TPM4P67936 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.78■□□□□ 0.44
TPM4P67936 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.78■□□□□ 0.44
TPM4P67936 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TPM4P67936 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.78■□□□□ 0.44
TPM4P67936 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 ST20-AS1-201ENST00000560255 4223 ntBASIC17.78■□□□□ 0.44
TPM4P67936 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TPM4P67936 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.78■□□□□ 0.44
TPM4P67936 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TPM4P67936 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC17.77■□□□□ 0.44
TPM4P67936 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM4P67936 AC106881.1-201ENST00000605849 3329 ntBASIC17.77■□□□□ 0.44
TPM4P67936 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TPM4P67936 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.77■□□□□ 0.44
TPM4P67936 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TPM4P67936 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.77■□□□□ 0.44
TPM4P67936 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM4P67936 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM4P67936 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.77■□□□□ 0.44
TPM4P67936 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.77■□□□□ 0.44
TPM4P67936 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM4P67936 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TPM4P67936 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TPM4P67936 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM4P67936 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TPM4P67936 GPX1P2-201ENST00000429271 606 ntBASIC17.77■□□□□ 0.44
TPM4P67936 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TPM4P67936 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.77■□□□□ 0.44
TPM4P67936 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.77■□□□□ 0.44
TPM4P67936 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.77■□□□□ 0.44
TPM4P67936 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.77■□□□□ 0.44
TPM4P67936 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.77■□□□□ 0.44
TPM4P67936 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.77■□□□□ 0.44
TPM4P67936 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM4P67936 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TPM4P67936 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TPM4P67936 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms