Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPS4XP62701 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.29□□□□□ -0.12
RPS4XP62701 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.29□□□□□ -0.12
RPS4XP62701 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.29□□□□□ -0.12
RPS4XP62701 BANF1P1-201ENST00000553684 263 ntBASIC14.29□□□□□ -0.12
RPS4XP62701 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.29□□□□□ -0.12
RPS4XP62701 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.29□□□□□ -0.12
RPS4XP62701 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.29□□□□□ -0.12
RPS4XP62701 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.29□□□□□ -0.12
RPS4XP62701 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.29□□□□□ -0.12
RPS4XP62701 AC011270.2-201ENST00000624293 2550 ntBASIC14.29□□□□□ -0.12
RPS4XP62701 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS4XP62701 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS4XP62701 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS4XP62701 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS4XP62701 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RPS4XP62701 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPS4XP62701 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RPS4XP62701 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RPS4XP62701 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS4XP62701 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS4XP62701 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RPS4XP62701 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS4XP62701 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.29□□□□□ -0.12
RPS4XP62701 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS4XP62701 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPS4XP62701 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.28□□□□□ -0.12
RPS4XP62701 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RPS4XP62701 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.28□□□□□ -0.12
RPS4XP62701 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.28□□□□□ -0.12
RPS4XP62701 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RPS4XP62701 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RPS4XP62701 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.28□□□□□ -0.12
RPS4XP62701 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 AC136604.1-201ENST00000418535 575 ntBASIC14.28□□□□□ -0.12
RPS4XP62701 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RPS4XP62701 SPDYE14P-201ENST00000442619 822 ntBASIC14.28□□□□□ -0.12
RPS4XP62701 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.28□□□□□ -0.12
RPS4XP62701 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 TERF1P3-201ENST00000505638 1227 ntBASIC14.28□□□□□ -0.12
RPS4XP62701 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.28□□□□□ -0.12
RPS4XP62701 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.28□□□□□ -0.12
RPS4XP62701 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.28□□□□□ -0.12
RPS4XP62701 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
RPS4XP62701 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RPS4XP62701 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.28□□□□□ -0.12
RPS4XP62701 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.28□□□□□ -0.12
RPS4XP62701 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RPS4XP62701 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RPS4XP62701 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS4XP62701 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS4XP62701 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RPS4XP62701 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RPS4XP62701 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS4XP62701 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS4XP62701 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RPS4XP62701 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.27□□□□□ -0.12
RPS4XP62701 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RPS4XP62701 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RPS4XP62701 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS4XP62701 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
RPS4XP62701 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
RPS4XP62701 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RPS4XP62701 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RPS4XP62701 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RPS4XP62701 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS4XP62701 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS4XP62701 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS4XP62701 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPS4XP62701 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS4XP62701 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RPS4XP62701 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RPS4XP62701 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.27□□□□□ -0.13
RPS4XP62701 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS4XP62701 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
RPS4XP62701 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS4XP62701 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.27□□□□□ -0.13
RPS4XP62701 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS4XP62701 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.27□□□□□ -0.13
RPS4XP62701 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
RPS4XP62701 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.27□□□□□ -0.13
RPS4XP62701 TREML5P-201ENST00000421694 576 ntBASIC14.27□□□□□ -0.13
RPS4XP62701 AL353705.2-201ENST00000428243 662 ntBASIC14.27□□□□□ -0.13
RPS4XP62701 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPS4XP62701 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms