Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SEC61A1P61619 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
SEC61A1P61619 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
SEC61A1P61619 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.94□□□□□ -0.18
SEC61A1P61619 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.94□□□□□ -0.18
SEC61A1P61619 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 SSR4P1-203ENST00000599569 2260 ntBASIC13.94□□□□□ -0.18
SEC61A1P61619 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.94□□□□□ -0.18
SEC61A1P61619 PCDHA3-202ENST00000532566 4594 ntBASIC13.94□□□□□ -0.18
SEC61A1P61619 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.94□□□□□ -0.18
SEC61A1P61619 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.94□□□□□ -0.18
SEC61A1P61619 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SEC61A1P61619 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.94□□□□□ -0.18
SEC61A1P61619 AC004461.1-201ENST00000412461 403 ntBASIC13.94□□□□□ -0.18
SEC61A1P61619 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.94□□□□□ -0.18
SEC61A1P61619 HCG4-201ENST00000418983 998 ntBASIC13.94□□□□□ -0.18
SEC61A1P61619 METTL21AP1-201ENST00000438852 635 ntBASIC13.94□□□□□ -0.18
SEC61A1P61619 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.94□□□□□ -0.18
SEC61A1P61619 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.94□□□□□ -0.18
SEC61A1P61619 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SEC61A1P61619 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.94□□□□□ -0.18
SEC61A1P61619 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.94□□□□□ -0.18
SEC61A1P61619 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.94□□□□□ -0.18
SEC61A1P61619 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SEC61A1P61619 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.94□□□□□ -0.18
SEC61A1P61619 AC087641.1-201ENST00000557561 1021 ntBASIC13.94□□□□□ -0.18
SEC61A1P61619 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SEC61A1P61619 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.94□□□□□ -0.18
SEC61A1P61619 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SEC61A1P61619 AL009183.1-201ENST00000603760 355 ntBASIC13.94□□□□□ -0.18
SEC61A1P61619 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.94□□□□□ -0.18
SEC61A1P61619 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.94□□□□□ -0.18
SEC61A1P61619 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.94□□□□□ -0.18
SEC61A1P61619 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.94□□□□□ -0.18
SEC61A1P61619 AC105339.1-204ENST00000636249 355 ntBASIC13.94□□□□□ -0.18
SEC61A1P61619 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 AC112504.1-201ENST00000623415 1841 ntBASIC13.94□□□□□ -0.18
SEC61A1P61619 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SEC61A1P61619 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SEC61A1P61619 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.94□□□□□ -0.18
SEC61A1P61619 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC61A1P61619 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SEC61A1P61619 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.93□□□□□ -0.18
SEC61A1P61619 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SEC61A1P61619 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.93□□□□□ -0.18
SEC61A1P61619 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 PMS2P2-201ENST00000425039 1128 ntBASIC13.93□□□□□ -0.18
SEC61A1P61619 AL671277.1-201ENST00000429656 993 ntBASIC13.93□□□□□ -0.18
SEC61A1P61619 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.93□□□□□ -0.18
SEC61A1P61619 AP000344.2-201ENST00000512987 629 ntBASIC13.93□□□□□ -0.18
SEC61A1P61619 KRT8P48-201ENST00000515599 1220 ntBASIC13.93□□□□□ -0.18
SEC61A1P61619 AC022145.2-201ENST00000598203 171 ntBASIC13.93□□□□□ -0.18
SEC61A1P61619 AL513210.1-201ENST00000629608 234 ntBASIC13.93□□□□□ -0.18
SEC61A1P61619 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SEC61A1P61619 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
SEC61A1P61619 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SEC61A1P61619 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SEC61A1P61619 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
SEC61A1P61619 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SEC61A1P61619 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms