Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CXCR4P61073 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.46□□□□□ -0.1
CXCR4P61073 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CXCR4P61073 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.45□□□□□ -0.1
CXCR4P61073 AP002414.3-201ENST00000589352 1468 ntBASIC14.45□□□□□ -0.1
CXCR4P61073 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CXCR4P61073 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.45□□□□□ -0.1
CXCR4P61073 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CXCR4P61073 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.45□□□□□ -0.1
CXCR4P61073 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CXCR4P61073 FAM185BP-201ENST00000443595 716 ntBASIC14.45□□□□□ -0.1
CXCR4P61073 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.45□□□□□ -0.1
CXCR4P61073 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.45□□□□□ -0.1
CXCR4P61073 MIR4313-201ENST00000580760 101 ntBASIC14.45□□□□□ -0.1
CXCR4P61073 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.45□□□□□ -0.1
CXCR4P61073 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.45□□□□□ -0.1
CXCR4P61073 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.45□□□□□ -0.1
CXCR4P61073 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.45□□□□□ -0.1
CXCR4P61073 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.45□□□□□ -0.1
CXCR4P61073 HSPA7-201ENST00000445535 1927 ntBASIC14.45□□□□□ -0.1
CXCR4P61073 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CXCR4P61073 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CXCR4P61073 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.45□□□□□ -0.1
CXCR4P61073 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCR4P61073 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.44□□□□□ -0.1
CXCR4P61073 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 AC136759.1-202ENST00000530858 2194 ntBASIC14.44□□□□□ -0.1
CXCR4P61073 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CXCR4P61073 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCR4P61073 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CXCR4P61073 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.44□□□□□ -0.1
CXCR4P61073 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CXCR4P61073 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
CXCR4P61073 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CXCR4P61073 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CXCR4P61073 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.44□□□□□ -0.1
CXCR4P61073 HMGA1P7-201ENST00000406908 502 ntBASIC14.44□□□□□ -0.1
CXCR4P61073 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CXCR4P61073 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.44□□□□□ -0.1
CXCR4P61073 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.44□□□□□ -0.1
CXCR4P61073 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.44□□□□□ -0.1
CXCR4P61073 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.44□□□□□ -0.1
CXCR4P61073 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CXCR4P61073 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 BX640514.1-201ENST00000583223 1918 ntBASIC14.44□□□□□ -0.1
CXCR4P61073 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.44□□□□□ -0.1
CXCR4P61073 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CXCR4P61073 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCR4P61073 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.44□□□□□ -0.1
CXCR4P61073 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 WASH3P-207ENST00000560956 1394 ntBASIC14.44□□□□□ -0.1
CXCR4P61073 FO538757.1-201ENST00000623083 1397 ntBASIC14.44□□□□□ -0.1
CXCR4P61073 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 AL137784.3-201ENST00000623858 2288 ntBASIC14.44□□□□□ -0.1
CXCR4P61073 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
CXCR4P61073 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCR4P61073 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms