Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.62■□□□□ 0.09
SRP54P61011 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.62■□□□□ 0.09
SRP54P61011 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 AC074338.1-201ENST00000416825 156 ntBASIC15.62■□□□□ 0.09
SRP54P61011 AC098850.1-201ENST00000419919 790 ntBASIC15.62■□□□□ 0.09
SRP54P61011 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
SRP54P61011 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.62■□□□□ 0.09
SRP54P61011 AC104596.2-201ENST00000512793 793 ntBASIC15.62■□□□□ 0.09
SRP54P61011 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.62■□□□□ 0.09
SRP54P61011 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.62■□□□□ 0.09
SRP54P61011 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.62■□□□□ 0.09
SRP54P61011 CTBP2P3-201ENST00000585629 1255 ntBASIC15.62■□□□□ 0.09
SRP54P61011 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.62■□□□□ 0.09
SRP54P61011 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SRP54P61011 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SRP54P61011 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SRP54P61011 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.62■□□□□ 0.09
SRP54P61011 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
SRP54P61011 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.62■□□□□ 0.09
SRP54P61011 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
SRP54P61011 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.62■□□□□ 0.09
SRP54P61011 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.62■□□□□ 0.09
SRP54P61011 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.62■□□□□ 0.09
SRP54P61011 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRP54P61011 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
SRP54P61011 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SRP54P61011 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.61■□□□□ 0.09
SRP54P61011 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SRP54P61011 AL512384.1-201ENST00000406683 331 ntBASIC15.61■□□□□ 0.09
SRP54P61011 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.61■□□□□ 0.09
SRP54P61011 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.61■□□□□ 0.09
SRP54P61011 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SRP54P61011 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
SRP54P61011 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.61■□□□□ 0.09
SRP54P61011 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
SRP54P61011 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.61■□□□□ 0.09
SRP54P61011 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SRP54P61011 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SRP54P61011 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.61■□□□□ 0.09
SRP54P61011 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.61■□□□□ 0.09
SRP54P61011 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.61■□□□□ 0.09
SRP54P61011 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SRP54P61011 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SRP54P61011 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.61■□□□□ 0.09
SRP54P61011 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.61■□□□□ 0.09
SRP54P61011 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SRP54P61011 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SRP54P61011 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.61■□□□□ 0.09
SRP54P61011 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRP54P61011 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRP54P61011 NORAD-201ENST00000565493 5339 ntBASIC15.6■□□□□ 0.09
SRP54P61011 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRP54P61011 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SRP54P61011 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRP54P61011 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.6■□□□□ 0.09
SRP54P61011 CLK3P2-201ENST00000427566 1453 ntBASIC15.6■□□□□ 0.09
SRP54P61011 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
SRP54P61011 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRP54P61011 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRP54P61011 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SRP54P61011 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.6■□□□□ 0.09
SRP54P61011 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.6■□□□□ 0.09
SRP54P61011 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SRP54P61011 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SRP54P61011 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SRP54P61011 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms