Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VSX2P58304 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
VSX2P58304 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VSX2P58304 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.17■□□□□ 0.02
VSX2P58304 AL136379.1-201ENST00000623471 2642 ntBASIC15.17■□□□□ 0.02
VSX2P58304 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.17■□□□□ 0.02
VSX2P58304 AL513523.2-202ENST00000427283 2040 ntBASIC15.17■□□□□ 0.02
VSX2P58304 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.17■□□□□ 0.02
VSX2P58304 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.17■□□□□ 0.02
VSX2P58304 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VSX2P58304 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VSX2P58304 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.17■□□□□ 0.02
VSX2P58304 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.17■□□□□ 0.02
VSX2P58304 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VSX2P58304 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.17■□□□□ 0.02
VSX2P58304 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
VSX2P58304 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.16■□□□□ 0.02
VSX2P58304 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.16■□□□□ 0.02
VSX2P58304 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
VSX2P58304 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.16■□□□□ 0.02
VSX2P58304 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
VSX2P58304 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
VSX2P58304 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
VSX2P58304 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
VSX2P58304 AC026691.1-201ENST00000602502 2017 ntBASIC15.16■□□□□ 0.02
VSX2P58304 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
VSX2P58304 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.16■□□□□ 0.02
VSX2P58304 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.16■□□□□ 0.02
VSX2P58304 SPTLC1P1-201ENST00000447199 261 ntBASIC15.16■□□□□ 0.02
VSX2P58304 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.16■□□□□ 0.02
VSX2P58304 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.16■□□□□ 0.02
VSX2P58304 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.16■□□□□ 0.02
VSX2P58304 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.16■□□□□ 0.02
VSX2P58304 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
VSX2P58304 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
VSX2P58304 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.16■□□□□ 0.02
VSX2P58304 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.16■□□□□ 0.02
VSX2P58304 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
VSX2P58304 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.16■□□□□ 0.02
VSX2P58304 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 AC068587.6-202ENST00000641839 5619 ntBASIC15.16■□□□□ 0.02
VSX2P58304 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
VSX2P58304 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.16■□□□□ 0.02
VSX2P58304 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VSX2P58304 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VSX2P58304 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.15■□□□□ 0.02
VSX2P58304 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VSX2P58304 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.15■□□□□ 0.02
VSX2P58304 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VSX2P58304 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VSX2P58304 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
VSX2P58304 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VSX2P58304 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VSX2P58304 SPDYE19P-201ENST00000338590 713 ntBASIC15.15■□□□□ 0.02
VSX2P58304 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
VSX2P58304 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.15■□□□□ 0.02
VSX2P58304 TARDBPP1-201ENST00000442013 1203 ntBASIC15.15■□□□□ 0.02
VSX2P58304 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.15■□□□□ 0.02
VSX2P58304 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.15■□□□□ 0.02
VSX2P58304 DOC2GP-202ENST00000514950 1163 ntBASIC15.15■□□□□ 0.02
VSX2P58304 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.15■□□□□ 0.02
VSX2P58304 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.15■□□□□ 0.02
VSX2P58304 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.15■□□□□ 0.02
VSX2P58304 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.15■□□□□ 0.02
VSX2P58304 AC023824.1-201ENST00000562945 2975 ntBASIC15.15■□□□□ 0.02
VSX2P58304 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.15■□□□□ 0.02
VSX2P58304 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.15■□□□□ 0.02
VSX2P58304 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms