Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.35■□□□□ 0.05
PDX1P52945 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PDX1P52945 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PDX1P52945 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PDX1P52945 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PDX1P52945 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.35■□□□□ 0.05
PDX1P52945 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PDX1P52945 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.35■□□□□ 0.05
PDX1P52945 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
PDX1P52945 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.35■□□□□ 0.05
PDX1P52945 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.35■□□□□ 0.05
PDX1P52945 USP32P1-208ENST00000506594 1164 ntBASIC15.35■□□□□ 0.05
PDX1P52945 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
PDX1P52945 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PDX1P52945 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.35■□□□□ 0.05
PDX1P52945 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.35■□□□□ 0.05
PDX1P52945 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PDX1P52945 AL158212.4-201ENST00000624062 1286 ntBASIC15.35■□□□□ 0.05
PDX1P52945 COX11-210ENST00000639671 696 ntBASIC15.35■□□□□ 0.05
PDX1P52945 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PDX1P52945 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
PDX1P52945 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDX1P52945 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 AC006449.6-201ENST00000612330 2296 ntBASIC15.34■□□□□ 0.05
PDX1P52945 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.34■□□□□ 0.05
PDX1P52945 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PDX1P52945 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PDX1P52945 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.34■□□□□ 0.05
PDX1P52945 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.34■□□□□ 0.05
PDX1P52945 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 REXO1L8P-201ENST00000604378 1897 ntBASIC15.34■□□□□ 0.05
PDX1P52945 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
PDX1P52945 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PDX1P52945 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.34■□□□□ 0.05
PDX1P52945 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.34■□□□□ 0.05
PDX1P52945 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.34■□□□□ 0.05
PDX1P52945 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.34■□□□□ 0.05
PDX1P52945 EEF1DP4-201ENST00000446006 880 ntBASIC15.34■□□□□ 0.05
PDX1P52945 KRT223P-202ENST00000449164 1292 ntBASIC15.34■□□□□ 0.05
PDX1P52945 POU5F1P6-201ENST00000466990 990 ntBASIC15.34■□□□□ 0.05
PDX1P52945 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.34■□□□□ 0.05
PDX1P52945 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.34■□□□□ 0.05
PDX1P52945 AC092658.1-201ENST00000505836 891 ntBASIC15.34■□□□□ 0.05
PDX1P52945 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.34■□□□□ 0.05
PDX1P52945 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.34■□□□□ 0.05
PDX1P52945 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.34■□□□□ 0.05
PDX1P52945 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PDX1P52945 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 AC015936.2-201ENST00000593177 259 ntBASIC15.34■□□□□ 0.05
PDX1P52945 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PDX1P52945 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PDX1P52945 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
PDX1P52945 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PDX1P52945 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.34■□□□□ 0.05
PDX1P52945 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.34■□□□□ 0.05
PDX1P52945 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.34■□□□□ 0.05
PDX1P52945 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.34■□□□□ 0.05
PDX1P52945 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.34■□□□□ 0.05
PDX1P52945 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
PDX1P52945 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDX1P52945 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms