Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.68□□□□□ -0.22
HCFC1P51610 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.68□□□□□ -0.22
HCFC1P51610 AC015910.1-201ENST00000579400 975 ntBASIC13.68□□□□□ -0.22
HCFC1P51610 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.68□□□□□ -0.22
HCFC1P51610 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.68□□□□□ -0.22
HCFC1P51610 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 AC005695.3-201ENST00000614522 232 ntBASIC13.68□□□□□ -0.22
HCFC1P51610 AC134407.2-201ENST00000625089 1978 ntBASIC13.68□□□□□ -0.22
HCFC1P51610 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.68□□□□□ -0.22
HCFC1P51610 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
HCFC1P51610 AC132872.4-202ENST00000622924 2756 ntBASIC13.68□□□□□ -0.22
HCFC1P51610 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
HCFC1P51610 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
HCFC1P51610 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
HCFC1P51610 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
HCFC1P51610 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.68□□□□□ -0.22
HCFC1P51610 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 KRT8P13-201ENST00000463294 1010 ntBASIC13.68□□□□□ -0.22
HCFC1P51610 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HCFC1P51610 AC026410.3-201ENST00000514280 936 ntBASIC13.68□□□□□ -0.22
HCFC1P51610 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HCFC1P51610 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.68□□□□□ -0.22
HCFC1P51610 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCFC1P51610 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 ALOX12P2-203ENST00000570921 1945 ntBASIC13.67□□□□□ -0.22
HCFC1P51610 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.67□□□□□ -0.22
HCFC1P51610 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.67□□□□□ -0.22
HCFC1P51610 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.67□□□□□ -0.22
HCFC1P51610 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.67□□□□□ -0.22
HCFC1P51610 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.67□□□□□ -0.22
HCFC1P51610 FAM86HP-204ENST00000513466 959 ntBASIC13.67□□□□□ -0.22
HCFC1P51610 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
HCFC1P51610 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.67□□□□□ -0.22
HCFC1P51610 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HCFC1P51610 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 AL391005.1-201ENST00000623953 2435 ntBASIC13.67□□□□□ -0.22
HCFC1P51610 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.67□□□□□ -0.22
HCFC1P51610 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HCFC1P51610 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
HCFC1P51610 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCFC1P51610 AL513523.2-202ENST00000427283 2040 ntBASIC13.67□□□□□ -0.22
HCFC1P51610 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.66□□□□□ -0.22
HCFC1P51610 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.66□□□□□ -0.22
HCFC1P51610 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.66□□□□□ -0.22
HCFC1P51610 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCFC1P51610 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCFC1P51610 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCFC1P51610 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCFC1P51610 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.66□□□□□ -0.22
HCFC1P51610 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HCFC1P51610 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.66□□□□□ -0.22
HCFC1P51610 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
HCFC1P51610 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCFC1P51610 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.66□□□□□ -0.22
HCFC1P51610 AC097359.3-201ENST00000603982 1210 ntBASIC13.66□□□□□ -0.22
HCFC1P51610 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.66□□□□□ -0.22
HCFC1P51610 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.66□□□□□ -0.22
HCFC1P51610 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.66□□□□□ -0.22
HCFC1P51610 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.66□□□□□ -0.22
HCFC1P51610 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HCFC1P51610 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCFC1P51610 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HCFC1P51610 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HCFC1P51610 REXO1L1P-202ENST00000608646 1974 ntBASIC13.66□□□□□ -0.22
HCFC1P51610 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HCFC1P51610 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms