Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.96□□□□□ -0.17
CX3CR1P49238 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.96□□□□□ -0.17
CX3CR1P49238 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.96□□□□□ -0.17
CX3CR1P49238 LINC01225-203ENST00000563550 1244 ntBASIC13.96□□□□□ -0.17
CX3CR1P49238 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.96□□□□□ -0.17
CX3CR1P49238 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.96□□□□□ -0.17
CX3CR1P49238 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.96□□□□□ -0.17
CX3CR1P49238 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CX3CR1P49238 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CX3CR1P49238 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.96□□□□□ -0.18
CX3CR1P49238 AC092127.1-201ENST00000567093 3455 ntBASIC13.96□□□□□ -0.18
CX3CR1P49238 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.96□□□□□ -0.18
CX3CR1P49238 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CX3CR1P49238 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.96□□□□□ -0.18
CX3CR1P49238 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CX3CR1P49238 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.96□□□□□ -0.18
CX3CR1P49238 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CX3CR1P49238 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CX3CR1P49238 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CX3CR1P49238 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 AL136982.4-201ENST00000437689 1740 ntBASIC13.95□□□□□ -0.18
CX3CR1P49238 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CX3CR1P49238 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.95□□□□□ -0.18
CX3CR1P49238 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.95□□□□□ -0.18
CX3CR1P49238 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.95□□□□□ -0.18
CX3CR1P49238 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.95□□□□□ -0.18
CX3CR1P49238 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.95□□□□□ -0.18
CX3CR1P49238 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.95□□□□□ -0.18
CX3CR1P49238 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.95□□□□□ -0.18
CX3CR1P49238 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.95□□□□□ -0.18
CX3CR1P49238 SLC25A39P2-201ENST00000537614 270 ntBASIC13.95□□□□□ -0.18
CX3CR1P49238 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.95□□□□□ -0.18
CX3CR1P49238 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CX3CR1P49238 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.95□□□□□ -0.18
CX3CR1P49238 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
CX3CR1P49238 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.95□□□□□ -0.18
CX3CR1P49238 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.95□□□□□ -0.18
CX3CR1P49238 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CX3CR1P49238 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CX3CR1P49238 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.95□□□□□ -0.18
CX3CR1P49238 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.95□□□□□ -0.18
CX3CR1P49238 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.95□□□□□ -0.18
CX3CR1P49238 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.95□□□□□ -0.18
CX3CR1P49238 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.95□□□□□ -0.18
CX3CR1P49238 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CX3CR1P49238 AC097376.2-205ENST00000610159 5334 ntBASIC13.95□□□□□ -0.18
CX3CR1P49238 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.95□□□□□ -0.18
CX3CR1P49238 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.95□□□□□ -0.18
CX3CR1P49238 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.95□□□□□ -0.18
CX3CR1P49238 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CR1P49238 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CX3CR1P49238 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CX3CR1P49238 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.94□□□□□ -0.18
CX3CR1P49238 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.94□□□□□ -0.18
CX3CR1P49238 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CR1P49238 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CX3CR1P49238 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CX3CR1P49238 AL139010.1-201ENST00000454878 894 ntBASIC13.94□□□□□ -0.18
CX3CR1P49238 AC069335.1-201ENST00000489972 472 ntBASIC13.94□□□□□ -0.18
CX3CR1P49238 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms