Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.13■□□□□ 0.01
KRT20P35900 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.13■□□□□ 0.01
KRT20P35900 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
KRT20P35900 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
KRT20P35900 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 FAM45BP-202ENST00000592932 1624 ntBASIC15.13■□□□□ 0.01
KRT20P35900 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.13■□□□□ 0.01
KRT20P35900 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
KRT20P35900 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.13■□□□□ 0.01
KRT20P35900 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
KRT20P35900 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
KRT20P35900 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.13■□□□□ 0.01
KRT20P35900 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRT20P35900 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
KRT20P35900 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.12■□□□□ 0.01
KRT20P35900 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.12■□□□□ 0.01
KRT20P35900 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.12■□□□□ 0.01
KRT20P35900 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
KRT20P35900 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
KRT20P35900 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 AC069224.1-201ENST00000566372 1715 ntBASIC15.12■□□□□ 0.01
KRT20P35900 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.12■□□□□ 0.01
KRT20P35900 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
KRT20P35900 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
KRT20P35900 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.12■□□□□ 0.01
KRT20P35900 SPCS2P4-201ENST00000436160 681 ntBASIC15.12■□□□□ 0.01
KRT20P35900 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.12■□□□□ 0.01
KRT20P35900 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.12■□□□□ 0.01
KRT20P35900 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.12■□□□□ 0.01
KRT20P35900 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.12■□□□□ 0.01
KRT20P35900 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.12■□□□□ 0.01
KRT20P35900 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 AC022145.2-201ENST00000598203 171 ntBASIC15.12■□□□□ 0.01
KRT20P35900 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.12■□□□□ 0.01
KRT20P35900 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.12■□□□□ 0.01
KRT20P35900 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.12■□□□□ 0.01
KRT20P35900 AL365330.1-201ENST00000607459 531 ntBASIC15.12■□□□□ 0.01
KRT20P35900 AC105339.1-204ENST00000636249 355 ntBASIC15.12■□□□□ 0.01
KRT20P35900 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.12■□□□□ 0.01
KRT20P35900 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
KRT20P35900 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.12■□□□□ 0.01
KRT20P35900 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT20P35900 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
KRT20P35900 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
KRT20P35900 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
KRT20P35900 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
KRT20P35900 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
KRT20P35900 AC254562.1-201ENST00000417586 456 ntBASIC15.11■□□□□ 0.01
KRT20P35900 KRT18P32-201ENST00000424695 1287 ntBASIC15.11■□□□□ 0.01
KRT20P35900 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.11■□□□□ 0.01
KRT20P35900 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.11■□□□□ 0.01
KRT20P35900 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.11■□□□□ 0.01
KRT20P35900 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.11■□□□□ 0.01
KRT20P35900 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.11■□□□□ 0.01
KRT20P35900 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.11■□□□□ 0.01
KRT20P35900 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.11■□□□□ 0.01
KRT20P35900 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.11■□□□□ 0.01
KRT20P35900 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.11■□□□□ 0.01
KRT20P35900 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.11■□□□□ 0.01
KRT20P35900 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
KRT20P35900 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms