Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LMO1P25800 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LMO1P25800 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.29□□□□□ -0.28
LMO1P25800 SPDYE7P-202ENST00000420373 878 ntBASIC13.29□□□□□ -0.28
LMO1P25800 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.29□□□□□ -0.28
LMO1P25800 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.29□□□□□ -0.28
LMO1P25800 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.29□□□□□ -0.28
LMO1P25800 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LMO1P25800 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.29□□□□□ -0.28
LMO1P25800 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.29□□□□□ -0.28
LMO1P25800 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.29□□□□□ -0.28
LMO1P25800 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 AC003101.2-201ENST00000612557 442 ntBASIC13.29□□□□□ -0.28
LMO1P25800 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LMO1P25800 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LMO1P25800 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LMO1P25800 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LMO1P25800 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.29□□□□□ -0.28
LMO1P25800 AC092127.1-201ENST00000567093 3455 ntBASIC13.29□□□□□ -0.28
LMO1P25800 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.29□□□□□ -0.28
LMO1P25800 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LMO1P25800 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LMO1P25800 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO1P25800 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO1P25800 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LMO1P25800 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LMO1P25800 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LMO1P25800 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.28□□□□□ -0.28
LMO1P25800 LINC01101-201ENST00000622953 1884 ntBASIC13.28□□□□□ -0.28
LMO1P25800 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.28□□□□□ -0.28
LMO1P25800 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LMO1P25800 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO1P25800 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.28□□□□□ -0.28
LMO1P25800 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO1P25800 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO1P25800 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO1P25800 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO1P25800 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
LMO1P25800 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
LMO1P25800 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO1P25800 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
LMO1P25800 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO1P25800 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.28□□□□□ -0.28
LMO1P25800 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LMO1P25800 KRT8P12-202ENST00000472924 1397 ntBASIC13.28□□□□□ -0.28
LMO1P25800 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LMO1P25800 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
LMO1P25800 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LMO1P25800 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LMO1P25800 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
LMO1P25800 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LMO1P25800 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.28□□□□□ -0.28
LMO1P25800 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.28□□□□□ -0.28
LMO1P25800 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LMO1P25800 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.28□□□□□ -0.28
LMO1P25800 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LMO1P25800 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.27□□□□□ -0.28
LMO1P25800 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LMO1P25800 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LMO1P25800 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LMO1P25800 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LMO1P25800 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.27□□□□□ -0.28
LMO1P25800 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms