Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH3P22223 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH3P22223 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
CDH3P22223 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH3P22223 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.59■□□□□ 0.09
CDH3P22223 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
CDH3P22223 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH3P22223 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CDH3P22223 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH3P22223 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH3P22223 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH3P22223 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CDH3P22223 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH3P22223 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH3P22223 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH3P22223 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CDH3P22223 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CDH3P22223 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
CDH3P22223 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CDH3P22223 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.58■□□□□ 0.09
CDH3P22223 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH3P22223 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH3P22223 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CDH3P22223 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 AL139010.1-201ENST00000454878 894 ntBASIC15.58■□□□□ 0.08
CDH3P22223 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.58■□□□□ 0.08
CDH3P22223 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CDH3P22223 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 AL079307.3-201ENST00000556114 283 ntBASIC15.58■□□□□ 0.08
CDH3P22223 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH3P22223 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.58■□□□□ 0.08
CDH3P22223 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 ME2P1-201ENST00000426028 1970 ntBASIC15.58■□□□□ 0.08
CDH3P22223 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.58■□□□□ 0.08
CDH3P22223 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.08
CDH3P22223 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.58■□□□□ 0.08
CDH3P22223 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
CDH3P22223 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 AL592424.1-201ENST00000563624 1536 ntBASIC15.58■□□□□ 0.08
CDH3P22223 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH3P22223 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH3P22223 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH3P22223 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH3P22223 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CDH3P22223 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH3P22223 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CDH3P22223 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.57■□□□□ 0.08
CDH3P22223 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.57■□□□□ 0.08
CDH3P22223 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH3P22223 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.57■□□□□ 0.08
CDH3P22223 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.57■□□□□ 0.08
CDH3P22223 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.57■□□□□ 0.08
CDH3P22223 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH3P22223 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.57■□□□□ 0.08
CDH3P22223 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.57■□□□□ 0.08
CDH3P22223 AL133215.2-201ENST00000609242 977 ntBASIC15.57■□□□□ 0.08
CDH3P22223 TEX28P1-201ENST00000613479 1221 ntBASIC15.57■□□□□ 0.08
CDH3P22223 TEX28P2-201ENST00000617764 1221 ntBASIC15.57■□□□□ 0.08
CDH3P22223 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.57■□□□□ 0.08
CDH3P22223 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.57■□□□□ 0.08
CDH3P22223 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH3P22223 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms