Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.83■□□□□ 0.12
XRCC1P18887 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.83■□□□□ 0.12
XRCC1P18887 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.82■□□□□ 0.12
XRCC1P18887 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.82■□□□□ 0.12
XRCC1P18887 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
XRCC1P18887 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 CETN4P-206ENST00000642099 2168 ntBASIC15.82■□□□□ 0.12
XRCC1P18887 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.82■□□□□ 0.12
XRCC1P18887 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
XRCC1P18887 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.82■□□□□ 0.12
XRCC1P18887 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.82■□□□□ 0.12
XRCC1P18887 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.82■□□□□ 0.12
XRCC1P18887 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.82■□□□□ 0.12
XRCC1P18887 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.82■□□□□ 0.12
XRCC1P18887 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.82■□□□□ 0.12
XRCC1P18887 AC026979.3-201ENST00000607315 403 ntBASIC15.82■□□□□ 0.12
XRCC1P18887 SPDYE12P-201ENST00000618416 771 ntBASIC15.82■□□□□ 0.12
XRCC1P18887 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
XRCC1P18887 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.82■□□□□ 0.12
XRCC1P18887 AC100757.3-201ENST00000622361 1406 ntBASIC15.82■□□□□ 0.12
XRCC1P18887 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.82■□□□□ 0.12
XRCC1P18887 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.82■□□□□ 0.12
XRCC1P18887 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.82■□□□□ 0.12
XRCC1P18887 FAM45BP-202ENST00000592932 1624 ntBASIC15.82■□□□□ 0.12
XRCC1P18887 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.82■□□□□ 0.12
XRCC1P18887 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
XRCC1P18887 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.82■□□□□ 0.12
XRCC1P18887 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.82■□□□□ 0.12
XRCC1P18887 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
XRCC1P18887 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.82■□□□□ 0.12
XRCC1P18887 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.81■□□□□ 0.12
XRCC1P18887 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.81■□□□□ 0.12
XRCC1P18887 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
XRCC1P18887 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.81■□□□□ 0.12
XRCC1P18887 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.81■□□□□ 0.12
XRCC1P18887 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.81■□□□□ 0.12
XRCC1P18887 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.81■□□□□ 0.12
XRCC1P18887 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
XRCC1P18887 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.81■□□□□ 0.12
XRCC1P18887 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.81■□□□□ 0.12
XRCC1P18887 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
XRCC1P18887 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
XRCC1P18887 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.81■□□□□ 0.12
XRCC1P18887 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.81■□□□□ 0.12
XRCC1P18887 MTND6P24-201ENST00000440466 518 ntBASIC15.81■□□□□ 0.12
XRCC1P18887 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
XRCC1P18887 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.81■□□□□ 0.12
XRCC1P18887 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.81■□□□□ 0.12
XRCC1P18887 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.81■□□□□ 0.12
XRCC1P18887 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.81■□□□□ 0.12
XRCC1P18887 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.81■□□□□ 0.12
XRCC1P18887 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.81■□□□□ 0.12
XRCC1P18887 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.81■□□□□ 0.12
XRCC1P18887 AL589739.1-201ENST00000607720 493 ntBASIC15.81■□□□□ 0.12
XRCC1P18887 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.81■□□□□ 0.12
XRCC1P18887 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.81■□□□□ 0.12
XRCC1P18887 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
XRCC1P18887 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC1P18887 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC1P18887 SSR4P1-203ENST00000599569 2260 ntBASIC15.8■□□□□ 0.12
XRCC1P18887 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC1P18887 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC1P18887 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.8■□□□□ 0.12
XRCC1P18887 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms