Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SMPD1P17405 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SMPD1P17405 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.39■□□□□ 0.37
SMPD1P17405 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.39■□□□□ 0.37
SMPD1P17405 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SMPD1P17405 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.39■□□□□ 0.37
SMPD1P17405 Z93015.1-201ENST00000451718 390 ntBASIC17.39■□□□□ 0.37
SMPD1P17405 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SMPD1P17405 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.39■□□□□ 0.37
SMPD1P17405 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.39■□□□□ 0.37
SMPD1P17405 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SMPD1P17405 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.39■□□□□ 0.37
SMPD1P17405 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SMPD1P17405 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.39■□□□□ 0.37
SMPD1P17405 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.39■□□□□ 0.37
SMPD1P17405 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.39■□□□□ 0.37
SMPD1P17405 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SMPD1P17405 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SMPD1P17405 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMPD1P17405 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.39■□□□□ 0.37
SMPD1P17405 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.38■□□□□ 0.37
SMPD1P17405 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.38■□□□□ 0.37
SMPD1P17405 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SMPD1P17405 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.38■□□□□ 0.37
SMPD1P17405 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.38■□□□□ 0.37
SMPD1P17405 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.38■□□□□ 0.37
SMPD1P17405 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SMPD1P17405 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 MTHFR-217ENST00000641820 1569 ntBASIC17.38■□□□□ 0.37
SMPD1P17405 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
SMPD1P17405 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.38■□□□□ 0.37
SMPD1P17405 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.38■□□□□ 0.37
SMPD1P17405 ACTBP8-201ENST00000403258 1108 ntBASIC17.38■□□□□ 0.37
SMPD1P17405 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.38■□□□□ 0.37
SMPD1P17405 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.38■□□□□ 0.37
SMPD1P17405 AC104306.2-201ENST00000451877 341 ntBASIC17.38■□□□□ 0.37
SMPD1P17405 KRT8P13-201ENST00000463294 1010 ntBASIC17.38■□□□□ 0.37
SMPD1P17405 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.38■□□□□ 0.37
SMPD1P17405 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.38■□□□□ 0.37
SMPD1P17405 AC006453.4-201ENST00000636949 1252 ntBASIC17.38■□□□□ 0.37
SMPD1P17405 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.38■□□□□ 0.37
SMPD1P17405 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
SMPD1P17405 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.38■□□□□ 0.37
SMPD1P17405 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
SMPD1P17405 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
SMPD1P17405 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMPD1P17405 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMPD1P17405 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMPD1P17405 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.37■□□□□ 0.37
SMPD1P17405 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SMPD1P17405 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMPD1P17405 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
SMPD1P17405 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMPD1P17405 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.37■□□□□ 0.37
SMPD1P17405 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMPD1P17405 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMPD1P17405 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SMPD1P17405 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.37■□□□□ 0.37
SMPD1P17405 AC007969.1-201ENST00000433675 447 ntBASIC17.37■□□□□ 0.37
SMPD1P17405 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.37■□□□□ 0.37
SMPD1P17405 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SMPD1P17405 AL591846.1-201ENST00000451736 433 ntBASIC17.37■□□□□ 0.37
SMPD1P17405 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SMPD1P17405 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms