Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TOP1P11387 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TOP1P11387 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.58■□□□□ 0.56
TOP1P11387 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TOP1P11387 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TOP1P11387 AL353779.1-201ENST00000434793 351 ntBASIC18.58■□□□□ 0.56
TOP1P11387 RPL13P2-201ENST00000440687 659 ntBASIC18.58■□□□□ 0.56
TOP1P11387 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.58■□□□□ 0.56
TOP1P11387 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
TOP1P11387 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
TOP1P11387 API5-211ENST00000534695 560 ntTSL 5 BASIC18.58■□□□□ 0.56
TOP1P11387 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.58■□□□□ 0.56
TOP1P11387 TIMM17BP1-201ENST00000545713 516 ntBASIC18.58■□□□□ 0.56
TOP1P11387 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TOP1P11387 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.58■□□□□ 0.56
TOP1P11387 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
TOP1P11387 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.58■□□□□ 0.56
TOP1P11387 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TOP1P11387 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.58■□□□□ 0.56
TOP1P11387 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.58■□□□□ 0.56
TOP1P11387 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TOP1P11387 AL662799.1-202ENST00000614205 422 ntBASIC18.58■□□□□ 0.56
TOP1P11387 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TOP1P11387 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
TOP1P11387 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TOP1P11387 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
TOP1P11387 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
TOP1P11387 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TOP1P11387 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TOP1P11387 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.58■□□□□ 0.56
TOP1P11387 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.58■□□□□ 0.56
TOP1P11387 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TOP1P11387 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TOP1P11387 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TOP1P11387 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.58■□□□□ 0.56
TOP1P11387 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TOP1P11387 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TOP1P11387 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TOP1P11387 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TOP1P11387 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.57■□□□□ 0.56
TOP1P11387 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.57■□□□□ 0.56
TOP1P11387 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.57■□□□□ 0.56
TOP1P11387 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TOP1P11387 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
TOP1P11387 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
TOP1P11387 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.57■□□□□ 0.56
TOP1P11387 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.57■□□□□ 0.56
TOP1P11387 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.57■□□□□ 0.56
TOP1P11387 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.57■□□□□ 0.56
TOP1P11387 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.57■□□□□ 0.56
TOP1P11387 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.57■□□□□ 0.56
TOP1P11387 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.57■□□□□ 0.56
TOP1P11387 TPRX2P-201ENST00000535362 881 ntBASIC18.57■□□□□ 0.56
TOP1P11387 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TOP1P11387 AC097359.3-201ENST00000603982 1210 ntBASIC18.57■□□□□ 0.56
TOP1P11387 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.57■□□□□ 0.56
TOP1P11387 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.57■□□□□ 0.56
TOP1P11387 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 AC103702.1-201ENST00000548801 2630 ntBASIC18.57■□□□□ 0.56
TOP1P11387 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.57■□□□□ 0.56
TOP1P11387 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.57■□□□□ 0.56
TOP1P11387 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 CDC14C-201ENST00000428251 1719 ntBASIC18.57■□□□□ 0.56
TOP1P11387 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.57■□□□□ 0.56
TOP1P11387 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TOP1P11387 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TOP1P11387 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TOP1P11387 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.56■□□□□ 0.56
TOP1P11387 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.56■□□□□ 0.56
TOP1P11387 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 AC018892.3-201ENST00000623986 2499 ntBASIC18.56■□□□□ 0.56
TOP1P11387 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TOP1P11387 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
TOP1P11387 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.56■□□□□ 0.56
TOP1P11387 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.56■□□□□ 0.56
TOP1P11387 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TOP1P11387 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TOP1P11387 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms