Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PTPRFP10586 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PTPRFP10586 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPRFP10586 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.76■□□□□ 0.43
PTPRFP10586 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPRFP10586 IMP3P2-201ENST00000489760 475 ntBASIC17.76■□□□□ 0.43
PTPRFP10586 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPRFP10586 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PTPRFP10586 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPRFP10586 AC079328.1-201ENST00000560358 952 ntBASIC17.76■□□□□ 0.43
PTPRFP10586 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.76■□□□□ 0.43
PTPRFP10586 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.76■□□□□ 0.43
PTPRFP10586 AC091544.8-201ENST00000619490 361 ntBASIC17.76■□□□□ 0.43
PTPRFP10586 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.76■□□□□ 0.43
PTPRFP10586 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPRFP10586 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPRFP10586 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPRFP10586 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPRFP10586 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPRFP10586 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PTPRFP10586 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPRFP10586 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.75■□□□□ 0.43
PTPRFP10586 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPRFP10586 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.75■□□□□ 0.43
PTPRFP10586 COX5BP1-201ENST00000507622 393 ntBASIC17.75■□□□□ 0.43
PTPRFP10586 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPRFP10586 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPRFP10586 AC022748.3-201ENST00000621828 275 ntBASIC17.75■□□□□ 0.43
PTPRFP10586 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPRFP10586 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPRFP10586 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PTPRFP10586 AC009090.5-201ENST00000624886 2285 ntBASIC17.75■□□□□ 0.43
PTPRFP10586 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPRFP10586 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.75■□□□□ 0.43
PTPRFP10586 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPRFP10586 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
PTPRFP10586 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPRFP10586 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPRFP10586 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPRFP10586 RN7SKP175-201ENST00000408472 289 ntBASIC17.74■□□□□ 0.43
PTPRFP10586 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPRFP10586 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPRFP10586 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.74■□□□□ 0.43
PTPRFP10586 TMEM198B-204ENST00000484016 896 ntBASIC17.74■□□□□ 0.43
PTPRFP10586 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPRFP10586 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.74■□□□□ 0.43
PTPRFP10586 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.74■□□□□ 0.43
PTPRFP10586 CLUHP2-201ENST00000426660 1303 ntBASIC17.74■□□□□ 0.43
PTPRFP10586 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.74■□□□□ 0.43
PTPRFP10586 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
PTPRFP10586 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPRFP10586 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPRFP10586 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPRFP10586 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
PTPRFP10586 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPRFP10586 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPRFP10586 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
PTPRFP10586 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPRFP10586 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPRFP10586 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPRFP10586 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPRFP10586 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPRFP10586 CYP46A4P-201ENST00000414953 267 ntBASIC17.74■□□□□ 0.43
PTPRFP10586 FNTAP2-201ENST00000430308 634 ntBASIC17.74■□□□□ 0.43
PTPRFP10586 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPRFP10586 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PTPRFP10586 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.74■□□□□ 0.43
PTPRFP10586 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPRFP10586 OR10B1P-201ENST00000601666 907 ntBASIC17.74■□□□□ 0.43
PTPRFP10586 AC026740.1-201ENST00000607068 791 ntBASIC17.74■□□□□ 0.43
PTPRFP10586 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PTPRFP10586 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPRFP10586 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PTPRFP10586 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PTPRFP10586 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPRFP10586 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPRFP10586 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PTPRFP10586 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
PTPRFP10586 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPRFP10586 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPRFP10586 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPRFP10586 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPRFP10586 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPRFP10586 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPRFP10586 AC008132.1-202ENST00000342005 1389 ntBASIC17.73■□□□□ 0.43
PTPRFP10586 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PTPRFP10586 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPRFP10586 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.73■□□□□ 0.43
PTPRFP10586 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms