Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC20.48■□□□□ 0.87
LTN1O94822 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC20.48■□□□□ 0.87
LTN1O94822 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LTN1O94822 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LTN1O94822 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC20.48■□□□□ 0.87
LTN1O94822 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LTN1O94822 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC20.48■□□□□ 0.87
LTN1O94822 AC100850.1-201ENST00000506768 649 ntBASIC20.48■□□□□ 0.87
LTN1O94822 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC20.48■□□□□ 0.87
LTN1O94822 RN7SL574P-201ENST00000581512 297 ntBASIC20.48■□□□□ 0.87
LTN1O94822 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC20.48■□□□□ 0.87
LTN1O94822 AC138627.1-207ENST00000641560 1006 ntBASIC20.48■□□□□ 0.87
LTN1O94822 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LTN1O94822 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LTN1O94822 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LTN1O94822 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LTN1O94822 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LTN1O94822 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LTN1O94822 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTN1O94822 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTN1O94822 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTN1O94822 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC20.47■□□□□ 0.87
LTN1O94822 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LTN1O94822 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC20.47■□□□□ 0.87
LTN1O94822 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
LTN1O94822 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC20.47■□□□□ 0.87
LTN1O94822 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.47■□□□□ 0.87
LTN1O94822 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC20.47■□□□□ 0.87
LTN1O94822 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
LTN1O94822 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC20.47■□□□□ 0.87
LTN1O94822 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTN1O94822 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC20.47■□□□□ 0.87
LTN1O94822 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTN1O94822 KRT8P19-201ENST00000551916 1455 ntBASIC20.47■□□□□ 0.87
LTN1O94822 AC006449.5-201ENST00000610658 2098 ntBASIC20.47■□□□□ 0.87
LTN1O94822 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC20.47■□□□□ 0.87
LTN1O94822 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTN1O94822 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20.47■□□□□ 0.87
LTN1O94822 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LTN1O94822 REXO1L4P-201ENST00000605109 1937 ntBASIC20.47■□□□□ 0.87
LTN1O94822 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTN1O94822 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LTN1O94822 TPM3P8-201ENST00000330554 643 ntBASIC20.46■□□□□ 0.87
LTN1O94822 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.46■□□□□ 0.87
LTN1O94822 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTN1O94822 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC20.46■□□□□ 0.87
LTN1O94822 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC20.46■□□□□ 0.87
LTN1O94822 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LTN1O94822 MIR3619-201ENST00000579667 83 ntBASIC20.46■□□□□ 0.87
LTN1O94822 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC20.46■□□□□ 0.87
LTN1O94822 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC20.46■□□□□ 0.87
LTN1O94822 AL603764.1-201ENST00000636452 321 ntBASIC20.46■□□□□ 0.87
LTN1O94822 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC20.46■□□□□ 0.87
LTN1O94822 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTN1O94822 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LTN1O94822 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTN1O94822 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC20.46■□□□□ 0.87
LTN1O94822 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTN1O94822 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
LTN1O94822 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20.46■□□□□ 0.87
LTN1O94822 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LTN1O94822 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LTN1O94822 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
LTN1O94822 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTN1O94822 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTN1O94822 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
LTN1O94822 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTN1O94822 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC20.46■□□□□ 0.87
LTN1O94822 UPF3AP2-201ENST00000457924 1132 ntBASIC20.46■□□□□ 0.87
LTN1O94822 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC20.46■□□□□ 0.87
LTN1O94822 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC20.46■□□□□ 0.87
LTN1O94822 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC20.46■□□□□ 0.87
LTN1O94822 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LTN1O94822 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTN1O94822 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTN1O94822 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTN1O94822 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LTN1O94822 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LTN1O94822 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LTN1O94822 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LTN1O94822 CYP2T1P-202ENST00000641596 2535 ntBASIC20.45■□□□□ 0.86
LTN1O94822 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LTN1O94822 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LTN1O94822 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LTN1O94822 AC092506.1-202ENST00000401022 528 ntBASIC20.45■□□□□ 0.86
LTN1O94822 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC20.45■□□□□ 0.86
LTN1O94822 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.45■□□□□ 0.86
LTN1O94822 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC20.45■□□□□ 0.86
LTN1O94822 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC20.45■□□□□ 0.86
LTN1O94822 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC20.45■□□□□ 0.86
LTN1O94822 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC20.45■□□□□ 0.86
LTN1O94822 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC20.45■□□□□ 0.86
LTN1O94822 AC015967.2-201ENST00000624092 234 ntBASIC20.45■□□□□ 0.86
LTN1O94822 AC006435.4-201ENST00000625037 234 ntBASIC20.45■□□□□ 0.86
LTN1O94822 AL356737.1-201ENST00000634391 234 ntBASIC20.45■□□□□ 0.86
LTN1O94822 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LTN1O94822 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LTN1O94822 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LTN1O94822 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LTN1O94822 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms