Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH16O75309 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH16O75309 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH16O75309 ZBED1P1-201ENST00000502364 1930 ntBASIC16.04■□□□□ 0.16
CDH16O75309 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH16O75309 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CDH16O75309 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH16O75309 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH16O75309 RNPS1P1-201ENST00000507437 918 ntBASIC16.04■□□□□ 0.16
CDH16O75309 PRYP6-201ENST00000514804 343 ntBASIC16.04■□□□□ 0.16
CDH16O75309 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH16O75309 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH16O75309 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH16O75309 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDH16O75309 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH16O75309 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CDH16O75309 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CDH16O75309 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.04■□□□□ 0.16
CDH16O75309 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH16O75309 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH16O75309 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
CDH16O75309 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH16O75309 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH16O75309 BNIP3P1-202ENST00000550043 1585 ntBASIC16.04■□□□□ 0.16
CDH16O75309 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH16O75309 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CDH16O75309 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH16O75309 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH16O75309 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH16O75309 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH16O75309 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH16O75309 AL691432.1-201ENST00000596308 1422 ntBASIC16.03■□□□□ 0.16
CDH16O75309 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH16O75309 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH16O75309 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH16O75309 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CDH16O75309 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CDH16O75309 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDH16O75309 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDH16O75309 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH16O75309 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.03■□□□□ 0.16
CDH16O75309 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH16O75309 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH16O75309 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.03■□□□□ 0.16
CDH16O75309 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH16O75309 MIR4751-201ENST00000578027 74 ntBASIC16.03■□□□□ 0.16
CDH16O75309 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.03■□□□□ 0.16
CDH16O75309 AC104692.2-201ENST00000603054 253 ntBASIC16.03■□□□□ 0.16
CDH16O75309 AL031008.1-201ENST00000619963 541 ntBASIC16.03■□□□□ 0.16
CDH16O75309 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH16O75309 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH16O75309 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDH16O75309 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CDH16O75309 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH16O75309 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH16O75309 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH16O75309 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH16O75309 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH16O75309 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH16O75309 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH16O75309 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH16O75309 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH16O75309 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH16O75309 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH16O75309 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH16O75309 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH16O75309 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH16O75309 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH16O75309 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH16O75309 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CDH16O75309 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CDH16O75309 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms