Protein–RNA interactions for Protein: O15554

KCNN4, Intermediate conductance calcium-activated potassium channel protein 4, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4O15554 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNN4O15554 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNN4O15554 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
KCNN4O15554 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNN4O15554 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.3■□□□□ 0.2
KCNN4O15554 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.3■□□□□ 0.2
KCNN4O15554 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNN4O15554 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.3■□□□□ 0.2
KCNN4O15554 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNN4O15554 MIR3687-2-201ENST00000577708 61 ntBASIC16.3■□□□□ 0.2
KCNN4O15554 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
KCNN4O15554 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.3■□□□□ 0.2
KCNN4O15554 MIR3687-1-201ENST00000614492 61 ntBASIC16.3■□□□□ 0.2
KCNN4O15554 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.3■□□□□ 0.2
KCNN4O15554 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNN4O15554 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNN4O15554 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNN4O15554 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNN4O15554 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNN4O15554 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNN4O15554 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
KCNN4O15554 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
KCNN4O15554 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNN4O15554 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNN4O15554 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNN4O15554 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
KCNN4O15554 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNN4O15554 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNN4O15554 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
KCNN4O15554 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.29■□□□□ 0.2
KCNN4O15554 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.29■□□□□ 0.2
KCNN4O15554 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
KCNN4O15554 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNN4O15554 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNN4O15554 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.29■□□□□ 0.2
KCNN4O15554 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNN4O15554 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
KCNN4O15554 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.29■□□□□ 0.2
KCNN4O15554 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNN4O15554 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.29■□□□□ 0.2
KCNN4O15554 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNN4O15554 AC112482.1-201ENST00000492080 688 ntBASIC16.29■□□□□ 0.2
KCNN4O15554 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.29■□□□□ 0.2
KCNN4O15554 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.29■□□□□ 0.2
KCNN4O15554 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.29■□□□□ 0.2
KCNN4O15554 AC018529.1-201ENST00000613063 361 ntBASIC16.29■□□□□ 0.2
KCNN4O15554 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
KCNN4O15554 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.29■□□□□ 0.2
KCNN4O15554 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
KCNN4O15554 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
KCNN4O15554 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNN4O15554 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNN4O15554 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KCNN4O15554 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KCNN4O15554 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KCNN4O15554 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
KCNN4O15554 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KCNN4O15554 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.28■□□□□ 0.2
KCNN4O15554 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.28■□□□□ 0.2
KCNN4O15554 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
KCNN4O15554 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.28■□□□□ 0.2
KCNN4O15554 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
KCNN4O15554 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KCNN4O15554 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KCNN4O15554 BX842568.4-201ENST00000421222 227 ntBASIC16.28■□□□□ 0.2
KCNN4O15554 RBPMS2P1-201ENST00000437762 623 ntBASIC16.28■□□□□ 0.2
KCNN4O15554 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.28■□□□□ 0.2
KCNN4O15554 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.28■□□□□ 0.2
KCNN4O15554 AP000344.2-201ENST00000512987 629 ntBASIC16.28■□□□□ 0.2
KCNN4O15554 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.28■□□□□ 0.2
KCNN4O15554 AC105021.1-202ENST00000570572 669 ntBASIC16.28■□□□□ 0.2
KCNN4O15554 AC003101.2-201ENST00000612557 442 ntBASIC16.28■□□□□ 0.2
KCNN4O15554 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KCNN4O15554 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
KCNN4O15554 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KCNN4O15554 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KCNN4O15554 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms