Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRANK1O15050 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRANK1O15050 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRANK1O15050 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRANK1O15050 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRANK1O15050 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.19■□□□□ 0.18
TRANK1O15050 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.19■□□□□ 0.18
TRANK1O15050 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.19■□□□□ 0.18
TRANK1O15050 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.19■□□□□ 0.18
TRANK1O15050 AL358472.3-201ENST00000608147 415 ntBASIC16.19■□□□□ 0.18
TRANK1O15050 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
TRANK1O15050 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
TRANK1O15050 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.19■□□□□ 0.18
TRANK1O15050 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.19■□□□□ 0.18
TRANK1O15050 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.19■□□□□ 0.18
TRANK1O15050 AC116345.2-201ENST00000512837 523 ntBASIC16.19■□□□□ 0.18
TRANK1O15050 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
TRANK1O15050 AC009779.1-201ENST00000551138 283 ntBASIC16.19■□□□□ 0.18
TRANK1O15050 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.19■□□□□ 0.18
TRANK1O15050 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.19■□□□□ 0.18
TRANK1O15050 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
TRANK1O15050 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.19■□□□□ 0.18
TRANK1O15050 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRANK1O15050 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRANK1O15050 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.19■□□□□ 0.18
TRANK1O15050 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.18■□□□□ 0.18
TRANK1O15050 AC005740.2-201ENST00000511085 419 ntBASIC16.18■□□□□ 0.18
TRANK1O15050 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.18■□□□□ 0.18
TRANK1O15050 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.18■□□□□ 0.18
TRANK1O15050 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.18■□□□□ 0.18
TRANK1O15050 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRANK1O15050 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRANK1O15050 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRANK1O15050 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRANK1O15050 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRANK1O15050 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRANK1O15050 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRANK1O15050 RN7SKP175-201ENST00000408472 289 ntBASIC16.18■□□□□ 0.18
TRANK1O15050 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRANK1O15050 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRANK1O15050 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRANK1O15050 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRANK1O15050 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRANK1O15050 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRANK1O15050 AC009093.2-202ENST00000620513 2079 ntBASIC16.18■□□□□ 0.18
TRANK1O15050 AC005332.8-201ENST00000622750 2735 ntBASIC16.18■□□□□ 0.18
TRANK1O15050 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRANK1O15050 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRANK1O15050 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRANK1O15050 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRANK1O15050 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRANK1O15050 TMCO5B-205ENST00000530020 894 ntBASIC16.18■□□□□ 0.18
TRANK1O15050 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.18■□□□□ 0.18
TRANK1O15050 AL022344.2-201ENST00000568976 968 ntBASIC16.18■□□□□ 0.18
TRANK1O15050 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.18■□□□□ 0.18
TRANK1O15050 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.18■□□□□ 0.18
TRANK1O15050 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRANK1O15050 AC079328.2-201ENST00000561241 3354 ntBASIC16.18■□□□□ 0.18
TRANK1O15050 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.17■□□□□ 0.18
TRANK1O15050 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRANK1O15050 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRANK1O15050 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.17■□□□□ 0.18
TRANK1O15050 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TRANK1O15050 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRANK1O15050 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.17■□□□□ 0.18
TRANK1O15050 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.17■□□□□ 0.18
TRANK1O15050 AC078991.1-201ENST00000437297 610 ntBASIC16.17■□□□□ 0.18
TRANK1O15050 NOC2LP1-201ENST00000450578 752 ntBASIC16.17■□□□□ 0.18
TRANK1O15050 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.17■□□□□ 0.18
TRANK1O15050 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRANK1O15050 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.17■□□□□ 0.18
TRANK1O15050 AC009955.4-201ENST00000597192 544 ntBASIC16.17■□□□□ 0.18
TRANK1O15050 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRANK1O15050 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.17■□□□□ 0.18
TRANK1O15050 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRANK1O15050 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRANK1O15050 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRANK1O15050 LRRC59-203ENST00000576448 1531 ntBASIC16.17■□□□□ 0.18
TRANK1O15050 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRANK1O15050 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
TRANK1O15050 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRANK1O15050 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRANK1O15050 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRANK1O15050 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms