Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.89■□□□□ 0.62
SEMA3EO15041 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
SEMA3EO15041 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SEMA3EO15041 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SEMA3EO15041 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.89■□□□□ 0.62
SEMA3EO15041 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SEMA3EO15041 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.89■□□□□ 0.61
SEMA3EO15041 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3EO15041 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3EO15041 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SEMA3EO15041 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3EO15041 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SEMA3EO15041 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3EO15041 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
SEMA3EO15041 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3EO15041 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.89■□□□□ 0.61
SEMA3EO15041 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SEMA3EO15041 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3EO15041 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.89■□□□□ 0.61
SEMA3EO15041 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3EO15041 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.89■□□□□ 0.61
SEMA3EO15041 RPS2P32-201ENST00000439199 892 ntBASIC18.89■□□□□ 0.61
SEMA3EO15041 AC104989.1-201ENST00000519711 778 ntBASIC18.89■□□□□ 0.61
SEMA3EO15041 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.89■□□□□ 0.61
SEMA3EO15041 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3EO15041 SNX29P1-201ENST00000548357 1007 ntBASIC18.89■□□□□ 0.61
SEMA3EO15041 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.89■□□□□ 0.61
SEMA3EO15041 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SEMA3EO15041 MIR6775-201ENST00000617557 69 ntBASIC18.89■□□□□ 0.61
SEMA3EO15041 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.89■□□□□ 0.61
SEMA3EO15041 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SEMA3EO15041 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.89■□□□□ 0.61
SEMA3EO15041 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.89■□□□□ 0.61
SEMA3EO15041 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
SEMA3EO15041 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.89■□□□□ 0.61
SEMA3EO15041 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3EO15041 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3EO15041 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SEMA3EO15041 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.88■□□□□ 0.61
SEMA3EO15041 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3EO15041 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3EO15041 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SEMA3EO15041 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SEMA3EO15041 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3EO15041 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3EO15041 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3EO15041 AC092933.1-201ENST00000393644 945 ntBASIC18.88■□□□□ 0.61
SEMA3EO15041 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.88■□□□□ 0.61
SEMA3EO15041 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3EO15041 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3EO15041 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.88■□□□□ 0.61
SEMA3EO15041 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.88■□□□□ 0.61
SEMA3EO15041 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA3EO15041 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SEMA3EO15041 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.88■□□□□ 0.61
SEMA3EO15041 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA3EO15041 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.88■□□□□ 0.61
SEMA3EO15041 AC133552.6-201ENST00000613406 534 ntBASIC18.88■□□□□ 0.61
SEMA3EO15041 AC134312.5-201ENST00000568031 1313 ntBASIC18.88■□□□□ 0.61
SEMA3EO15041 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA3EO15041 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA3EO15041 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3EO15041 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3EO15041 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3EO15041 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3EO15041 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA3EO15041 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3EO15041 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3EO15041 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3EO15041 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3EO15041 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3EO15041 ANKRD19P-201ENST00000338192 862 ntBASIC18.87■□□□□ 0.61
SEMA3EO15041 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3EO15041 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SEMA3EO15041 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SEMA3EO15041 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3EO15041 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.87■□□□□ 0.61
SEMA3EO15041 BCRP2-202ENST00000447763 634 ntBASIC18.87■□□□□ 0.61
SEMA3EO15041 AL138799.1-201ENST00000448213 1675 ntBASIC18.87■□□□□ 0.61
SEMA3EO15041 KRT223P-202ENST00000449164 1292 ntBASIC18.87■□□□□ 0.61
SEMA3EO15041 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.87■□□□□ 0.61
SEMA3EO15041 PDIA3P1-201ENST00000471856 1510 ntBASIC18.87■□□□□ 0.61
SEMA3EO15041 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.87■□□□□ 0.61
SEMA3EO15041 BCRP6-201ENST00000510112 632 ntBASIC18.87■□□□□ 0.61
SEMA3EO15041 BCRP7-201ENST00000511549 544 ntBASIC18.87■□□□□ 0.61
SEMA3EO15041 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.87■□□□□ 0.61
SEMA3EO15041 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.87■□□□□ 0.61
SEMA3EO15041 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.87■□□□□ 0.61
SEMA3EO15041 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.87■□□□□ 0.61
SEMA3EO15041 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.87■□□□□ 0.61
SEMA3EO15041 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SEMA3EO15041 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SEMA3EO15041 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3EO15041 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SEMA3EO15041 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3EO15041 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3EO15041 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms