Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC26.39■■□□□ 1.82
CUX2O14529 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC26.39■■□□□ 1.82
CUX2O14529 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CUX2O14529 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CUX2O14529 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC26.39■■□□□ 1.82
CUX2O14529 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CUX2O14529 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CUX2O14529 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CUX2O14529 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CUX2O14529 AC018470.1-201ENST00000624790 3129 ntBASIC26.39■■□□□ 1.82
CUX2O14529 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CUX2O14529 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC26.39■■□□□ 1.82
CUX2O14529 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC26.39■■□□□ 1.82
CUX2O14529 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CUX2O14529 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CUX2O14529 OR10B1P-201ENST00000601666 907 ntBASIC26.39■■□□□ 1.82
CUX2O14529 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
CUX2O14529 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CUX2O14529 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC26.39■■□□□ 1.82
CUX2O14529 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC26.39■■□□□ 1.81
CUX2O14529 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CUX2O14529 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC26.39■■□□□ 1.81
CUX2O14529 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CUX2O14529 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
CUX2O14529 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CUX2O14529 RNF216P1-203ENST00000404404 2427 ntBASIC26.39■■□□□ 1.81
CUX2O14529 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
CUX2O14529 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC26.39■■□□□ 1.81
CUX2O14529 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
CUX2O14529 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC26.38■■□□□ 1.81
CUX2O14529 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
CUX2O14529 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC26.38■■□□□ 1.81
CUX2O14529 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC26.38■■□□□ 1.81
CUX2O14529 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC26.38■■□□□ 1.81
CUX2O14529 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC26.38■■□□□ 1.81
CUX2O14529 NAT9-211ENST00000580632 799 ntTSL 3 BASIC26.38■■□□□ 1.81
CUX2O14529 AC007718.1-201ENST00000621078 280 ntBASIC26.38■■□□□ 1.81
CUX2O14529 AC073911.3-201ENST00000624401 631 ntBASIC26.38■■□□□ 1.81
CUX2O14529 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC26.38■■□□□ 1.81
CUX2O14529 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC26.38■■□□□ 1.81
CUX2O14529 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC26.38■■□□□ 1.81
CUX2O14529 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC26.38■■□□□ 1.81
CUX2O14529 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC26.38■■□□□ 1.81
CUX2O14529 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CUX2O14529 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CUX2O14529 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CUX2O14529 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC26.37■■□□□ 1.81
CUX2O14529 LINC00431-202ENST00000636375 159 ntBASIC26.37■■□□□ 1.81
CUX2O14529 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CUX2O14529 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CUX2O14529 AL138799.1-201ENST00000448213 1675 ntBASIC26.37■■□□□ 1.81
CUX2O14529 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC26.37■■□□□ 1.81
CUX2O14529 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
CUX2O14529 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC26.37■■□□□ 1.81
CUX2O14529 KRT8P4-201ENST00000509735 1454 ntBASIC26.37■■□□□ 1.81
CUX2O14529 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC26.37■■□□□ 1.81
CUX2O14529 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CUX2O14529 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
CUX2O14529 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CUX2O14529 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CUX2O14529 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC26.36■■□□□ 1.81
CUX2O14529 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
CUX2O14529 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC26.36■■□□□ 1.81
CUX2O14529 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC26.36■■□□□ 1.81
CUX2O14529 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC26.36■■□□□ 1.81
CUX2O14529 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC26.36■■□□□ 1.81
CUX2O14529 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC26.36■■□□□ 1.81
CUX2O14529 AL353622.2-201ENST00000605846 425 ntBASIC26.36■■□□□ 1.81
CUX2O14529 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CUX2O14529 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CUX2O14529 AC090502.4-201ENST00000551714 1386 ntBASIC26.36■■□□□ 1.81
CUX2O14529 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CUX2O14529 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CUX2O14529 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CUX2O14529 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CUX2O14529 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC26.36■■□□□ 1.81
CUX2O14529 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC26.36■■□□□ 1.81
CUX2O14529 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CUX2O14529 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CUX2O14529 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CUX2O14529 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
CUX2O14529 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC26.36■■□□□ 1.81
CUX2O14529 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms