Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 TNRC18P2-201ENST00000417666 2714 ntBASIC12.76□□□□□ -0.37
SRRM4A7MD48 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 AZGP1P1-201ENST00000411909 902 ntBASIC12.75□□□□□ -0.37
SRRM4A7MD48 UPF3AP3-201ENST00000420996 769 ntBASIC12.75□□□□□ -0.37
SRRM4A7MD48 BX842568.4-201ENST00000421222 227 ntBASIC12.75□□□□□ -0.37
SRRM4A7MD48 AL353705.2-201ENST00000428243 662 ntBASIC12.75□□□□□ -0.37
SRRM4A7MD48 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 SPDYE14P-201ENST00000442619 822 ntBASIC12.75□□□□□ -0.37
SRRM4A7MD48 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 AP000344.2-201ENST00000512987 629 ntBASIC12.75□□□□□ -0.37
SRRM4A7MD48 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 HNRNPUP1-201ENST00000554987 333 ntBASIC12.75□□□□□ -0.37
SRRM4A7MD48 AC026150.2-201ENST00000564693 1156 ntBASIC12.75□□□□□ -0.37
SRRM4A7MD48 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 AC004835.2-201ENST00000603762 682 ntBASIC12.75□□□□□ -0.37
SRRM4A7MD48 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.75□□□□□ -0.37
SRRM4A7MD48 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SRRM4A7MD48 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.74□□□□□ -0.37
SRRM4A7MD48 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SRRM4A7MD48 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SRRM4A7MD48 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SRRM4A7MD48 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SRRM4A7MD48 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SRRM4A7MD48 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SRRM4A7MD48 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SRRM4A7MD48 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SRRM4A7MD48 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SRRM4A7MD48 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SRRM4A7MD48 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SRRM4A7MD48 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SRRM4A7MD48 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SRRM4A7MD48 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SRRM4A7MD48 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.74□□□□□ -0.37
SRRM4A7MD48 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SRRM4A7MD48 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SRRM4A7MD48 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.74□□□□□ -0.37
SRRM4A7MD48 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.74□□□□□ -0.37
SRRM4A7MD48 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.74□□□□□ -0.37
SRRM4A7MD48 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.74□□□□□ -0.37
SRRM4A7MD48 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.74□□□□□ -0.37
SRRM4A7MD48 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SRRM4A7MD48 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.74□□□□□ -0.37
SRRM4A7MD48 AC003101.2-201ENST00000612557 442 ntBASIC12.74□□□□□ -0.37
SRRM4A7MD48 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.74□□□□□ -0.37
SRRM4A7MD48 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SRRM4A7MD48 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.74□□□□□ -0.37
SRRM4A7MD48 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SRRM4A7MD48 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.74□□□□□ -0.37
SRRM4A7MD48 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SRRM4A7MD48 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SRRM4A7MD48 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms