Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 AC138649.4-201ENST00000612222 287 ntBASIC16.13■□□□□ 0.17
CAPN8A6NHC0 AC073592.8-201ENST00000624126 511 ntBASIC16.13■□□□□ 0.17
CAPN8A6NHC0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 AC069224.1-201ENST00000566372 1715 ntBASIC16.13■□□□□ 0.17
CAPN8A6NHC0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 TNRC18P2-201ENST00000417666 2714 ntBASIC16.12■□□□□ 0.17
CAPN8A6NHC0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 MIR943-201ENST00000401286 94 ntBASIC16.12■□□□□ 0.17
CAPN8A6NHC0 SPDYE17-201ENST00000412399 783 ntBASIC16.12■□□□□ 0.17
CAPN8A6NHC0 AL080243.2-201ENST00000418783 582 ntBASIC16.12■□□□□ 0.17
CAPN8A6NHC0 TREML5P-201ENST00000421694 576 ntBASIC16.12■□□□□ 0.17
CAPN8A6NHC0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 RN7SL204P-201ENST00000582831 262 ntBASIC16.12■□□□□ 0.17
CAPN8A6NHC0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 AC134407.2-201ENST00000625089 1978 ntBASIC16.12■□□□□ 0.17
CAPN8A6NHC0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 FO538757.1-201ENST00000623083 1397 ntBASIC16.12■□□□□ 0.17
CAPN8A6NHC0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN8A6NHC0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.11■□□□□ 0.17
CAPN8A6NHC0 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.11■□□□□ 0.17
CAPN8A6NHC0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 AC092580.3-201ENST00000430932 139 ntBASIC16.11■□□□□ 0.17
CAPN8A6NHC0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 EEF1DP4-201ENST00000446006 880 ntBASIC16.11■□□□□ 0.17
CAPN8A6NHC0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 AL138828.2-201ENST00000615812 383 ntBASIC16.11■□□□□ 0.17
CAPN8A6NHC0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 BNIP3P1-202ENST00000550043 1585 ntBASIC16.11■□□□□ 0.17
CAPN8A6NHC0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.11■□□□□ 0.17
CAPN8A6NHC0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 AL603832.2-201ENST00000566195 2125 ntBASIC16.1■□□□□ 0.17
CAPN8A6NHC0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN8A6NHC0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms