Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC01546A6NGU7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01546A6NGU7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01546A6NGU7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01546A6NGU7 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.15□□□□□ -0.63
LINC01546A6NGU7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01546A6NGU7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01546A6NGU7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
LINC01546A6NGU7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01546A6NGU7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01546A6NGU7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01546A6NGU7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01546A6NGU7 AL591122.2-201ENST00000624125 1853 ntBASIC11.15□□□□□ -0.63
LINC01546A6NGU7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LINC01546A6NGU7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 AC138969.3-201ENST00000546612 1459 ntBASIC11.14□□□□□ -0.63
LINC01546A6NGU7 AC138932.2-201ENST00000548268 1459 ntBASIC11.14□□□□□ -0.63
LINC01546A6NGU7 AC126755.4-201ENST00000549796 1459 ntBASIC11.14□□□□□ -0.63
LINC01546A6NGU7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 AP000845.1-201ENST00000581677 2131 ntBASIC11.14□□□□□ -0.63
LINC01546A6NGU7 AC023090.2-201ENST00000625182 2110 ntBASIC11.14□□□□□ -0.63
LINC01546A6NGU7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 TSSC2-201ENST00000450217 709 ntBASIC11.14□□□□□ -0.63
LINC01546A6NGU7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 AL645728.2-201ENST00000641974 660 ntBASIC11.14□□□□□ -0.63
LINC01546A6NGU7 AC067930.6-201ENST00000623257 4947 ntBASIC11.14□□□□□ -0.63
LINC01546A6NGU7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01546A6NGU7 CICP20-201ENST00000443330 2801 ntBASIC11.13□□□□□ -0.63
LINC01546A6NGU7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 PMS2P7-201ENST00000506558 1336 ntBASIC11.13□□□□□ -0.63
LINC01546A6NGU7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01546A6NGU7 AC079781.5-202ENST00000641784 3743 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms