Protein–RNA interactions for Protein: A5D8V6

VPS37C, Vacuolar protein sorting-associated protein 37C, humanhuman

Predicted RBP Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37CA5D8V6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS37CA5D8V6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.52■□□□□ 0.56
VPS37CA5D8V6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VPS37CA5D8V6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VPS37CA5D8V6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VPS37CA5D8V6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
VPS37CA5D8V6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
VPS37CA5D8V6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VPS37CA5D8V6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VPS37CA5D8V6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
VPS37CA5D8V6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VPS37CA5D8V6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VPS37CA5D8V6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VPS37CA5D8V6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 AC127383.1-201ENST00000444697 1800 ntBASIC18.51■□□□□ 0.55
VPS37CA5D8V6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 MIR600HG-201ENST00000449175 5984 ntBASIC18.51■□□□□ 0.55
VPS37CA5D8V6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 ADH5P3-201ENST00000433842 1137 ntBASIC18.51■□□□□ 0.55
VPS37CA5D8V6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 TCAF2P1-201ENST00000291129 2421 ntBASIC18.51■□□□□ 0.55
VPS37CA5D8V6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS37CA5D8V6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 AC004987.2-201ENST00000395959 1148 ntBASIC18.5■□□□□ 0.55
VPS37CA5D8V6 MIR940-201ENST00000401276 94 ntBASIC18.5■□□□□ 0.55
VPS37CA5D8V6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 RN7SL589P-201ENST00000481268 310 ntBASIC18.5■□□□□ 0.55
VPS37CA5D8V6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 AC243562.1-201ENST00000560672 389 ntBASIC18.5■□□□□ 0.55
VPS37CA5D8V6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37CA5D8V6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
VPS37CA5D8V6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms