Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 FAM185BP-201ENST00000443595 716 ntBASIC17.25■□□□□ 0.35
CCDC66A2RUB6 AC018712.1-201ENST00000455767 687 ntBASIC17.25■□□□□ 0.35
CCDC66A2RUB6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 AC108073.2-201ENST00000464002 357 ntBASIC17.25■□□□□ 0.35
CCDC66A2RUB6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 AL160237.2-201ENST00000556165 472 ntBASIC17.25■□□□□ 0.35
CCDC66A2RUB6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 AL691432.3-201ENST00000621860 400 ntBASIC17.25■□□□□ 0.35
CCDC66A2RUB6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC66A2RUB6 U82695.1-201ENST00000635752 1889 ntBASIC17.24■□□□□ 0.35
CCDC66A2RUB6 AL109954.1-202ENST00000564051 2148 ntBASIC17.24■□□□□ 0.35
CCDC66A2RUB6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 MIR3909-201ENST00000579518 119 ntBASIC17.24■□□□□ 0.35
CCDC66A2RUB6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 ACTL9-202ENST00000612068 1252 ntBASIC17.24■□□□□ 0.35
CCDC66A2RUB6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 TP73-AS1-207ENST00000624167 988 ntBASIC17.24■□□□□ 0.35
CCDC66A2RUB6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 AP002414.3-201ENST00000589352 1468 ntBASIC17.24■□□□□ 0.35
CCDC66A2RUB6 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC66A2RUB6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 RPS2P28-201ENST00000314255 741 ntBASIC17.23■□□□□ 0.35
CCDC66A2RUB6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC66A2RUB6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms