Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 AL607033.1-201ENST00000623900 1599 ntBASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC187A0A096LP49 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 DRD5P1-201ENST00000456605 1438 ntBASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 CNN2P8-201ENST00000421872 913 ntBASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 GNRHR2-203ENST00000581100 1187 ntBASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 MIR3615-201ENST00000581999 87 ntBASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 AC107373.2-201ENST00000607735 490 ntBASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC187A0A096LP49 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 AP001582.1-201ENST00000525856 295 ntBASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms