Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 AC245100.5-201ENST00000452108 331 ntBASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 AC098859.1-201ENST00000502915 1238 ntBASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 SPTSSB-204ENST00000617024 1292 ntBASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 AC008267.7-201ENST00000624570 1194 ntBASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 FOXO1B-201ENST00000504678 1527 ntBASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 ADH5P3-201ENST00000433842 1137 ntBASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 SPDYE11-202ENST00000450699 704 ntBASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 RN7SL589P-201ENST00000481268 310 ntBASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 KRT8P48-201ENST00000515599 1220 ntBASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 AC243562.1-201ENST00000560672 389 ntBASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 SPDYE9P-201ENST00000570642 692 ntBASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 MTDHP5-201ENST00000598980 586 ntBASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 AC026120.1-201ENST00000611536 926 ntBASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 SPDYE10P-202ENST00000612005 668 ntBASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 SPDYE8P-202ENST00000612377 668 ntBASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms