Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 AL158070.2-201ENST00000623713 1621 ntBASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 AC022188.1-201ENST00000620960 1664 ntBASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 FXNP2-201ENST00000411625 547 ntBASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 CHMP1AP1-201ENST00000445563 662 ntBASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 IMP3P2-201ENST00000489760 475 ntBASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SLC52A1Q9NWF4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 AC124067.4-201ENST00000519691 2379 ntBASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 MIR769-201ENST00000390225 118 ntBASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 HINT2P1-201ENST00000419438 481 ntBASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 TUBBP5-203ENST00000508529 1334 ntBASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 HTR7P1-202ENST00000624664 4411 ntBASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SLC52A1Q9NWF4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 AL354877.1-201ENST00000424412 413 ntBASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 SPTLC1P5-201ENST00000450718 252 ntBASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 AP001505.2-201ENST00000616815 443 ntBASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 CU633904.3-201ENST00000624042 1029 ntBASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLC52A1Q9NWF4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SLC52A1Q9NWF4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC22.21■■□□□ 1.15
SLC52A1Q9NWF4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC22.21■■□□□ 1.15
SLC52A1Q9NWF4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC22.21■■□□□ 1.15
SLC52A1Q9NWF4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SLC52A1Q9NWF4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms