Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LIN7CQ9NUP9 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 HTR5BP-201ENST00000430851 1154 ntBASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 AC010327.4-202ENST00000591484 748 ntBASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 MIR4321-201ENST00000592276 80 ntBASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 AL078644.1-201ENST00000609881 752 ntBASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
LIN7CQ9NUP9 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.21□□□□□ -0.29
LIN7CQ9NUP9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms