Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 C18orf15-201ENST00000623680 2534 ntBASIC15.13■□□□□ 0.01
BRF2Q9HAW0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 HYMAI-201ENST00000635591 3347 ntBASIC15.13■□□□□ 0.01
BRF2Q9HAW0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 MTND6P24-201ENST00000440466 518 ntBASIC15.13■□□□□ 0.01
BRF2Q9HAW0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 AL079307.3-201ENST00000556114 283 ntBASIC15.13■□□□□ 0.01
BRF2Q9HAW0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 AC007326.2-201ENST00000624224 7579 ntBASIC15.13■□□□□ 0.01
BRF2Q9HAW0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
BRF2Q9HAW0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.12■□□□□ 0.01
BRF2Q9HAW0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 AC126365.1-201ENST00000578585 1514 ntBASIC15.12■□□□□ 0.01
BRF2Q9HAW0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 AC134684.3-201ENST00000641758 218 ntBASIC15.12■□□□□ 0.01
BRF2Q9HAW0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
BRF2Q9HAW0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms