Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
THUMPD3Q9BV44 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 BCAR1-209ENST00000546196 1340 ntBASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 AC004877.2-201ENST00000623941 599 ntBASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
THUMPD3Q9BV44 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
THUMPD3Q9BV44 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
THUMPD3Q9BV44 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.21■□□□□ 0.02
THUMPD3Q9BV44 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
THUMPD3Q9BV44 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
THUMPD3Q9BV44 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.21■□□□□ 0.02
THUMPD3Q9BV44 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
THUMPD3Q9BV44 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
THUMPD3Q9BV44 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
THUMPD3Q9BV44 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.21■□□□□ 0.02
THUMPD3Q9BV44 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.21■□□□□ 0.02
THUMPD3Q9BV44 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
THUMPD3Q9BV44 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 AC025580.3-201ENST00000617932 1424 ntBASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms