Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN18Q99952 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.85■□□□□ 0.45
PTPN18Q99952 AC022748.3-201ENST00000621828 275 ntBASIC17.85■□□□□ 0.45
PTPN18Q99952 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.85■□□□□ 0.45
PTPN18Q99952 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.85■□□□□ 0.45
PTPN18Q99952 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN18Q99952 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PTPN18Q99952 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PTPN18Q99952 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.84■□□□□ 0.45
PTPN18Q99952 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PTPN18Q99952 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PTPN18Q99952 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PTPN18Q99952 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PTPN18Q99952 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 AC006480.2-201ENST00000609770 1337 ntBASIC17.84■□□□□ 0.45
PTPN18Q99952 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PTPN18Q99952 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.84■□□□□ 0.45
PTPN18Q99952 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.84■□□□□ 0.45
PTPN18Q99952 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.84■□□□□ 0.45
PTPN18Q99952 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 AC008267.1-201ENST00000474858 1069 ntBASIC17.84■□□□□ 0.45
PTPN18Q99952 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
PTPN18Q99952 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.84■□□□□ 0.45
PTPN18Q99952 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.84■□□□□ 0.45
PTPN18Q99952 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 RN7SL713P-201ENST00000582127 302 ntBASIC17.84■□□□□ 0.45
PTPN18Q99952 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPN18Q99952 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.84■□□□□ 0.45
PTPN18Q99952 AP001002.3-201ENST00000623482 206 ntBASIC17.84■□□□□ 0.45
PTPN18Q99952 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PTPN18Q99952 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PTPN18Q99952 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.84■□□□□ 0.45
PTPN18Q99952 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
PTPN18Q99952 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PTPN18Q99952 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTPN18Q99952 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.84■□□□□ 0.45
PTPN18Q99952 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN18Q99952 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN18Q99952 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.83■□□□□ 0.45
PTPN18Q99952 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN18Q99952 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN18Q99952 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN18Q99952 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN18Q99952 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PTPN18Q99952 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PTPN18Q99952 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN18Q99952 DPM3-202ENST00000368399 517 ntBASIC17.83■□□□□ 0.44
PTPN18Q99952 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.83■□□□□ 0.44
PTPN18Q99952 AL008707.1-201ENST00000422498 534 ntBASIC17.83■□□□□ 0.44
PTPN18Q99952 AC100850.1-201ENST00000506768 649 ntBASIC17.83■□□□□ 0.44
PTPN18Q99952 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.83■□□□□ 0.44
PTPN18Q99952 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.83■□□□□ 0.44
PTPN18Q99952 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.83■□□□□ 0.44
PTPN18Q99952 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.83■□□□□ 0.44
PTPN18Q99952 MIR3147-201ENST00000577811 66 ntBASIC17.83■□□□□ 0.44
PTPN18Q99952 RN7SL555P-201ENST00000584742 339 ntBASIC17.83■□□□□ 0.44
PTPN18Q99952 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.83■□□□□ 0.44
PTPN18Q99952 AP000346.4-201ENST00000614827 381 ntBASIC17.83■□□□□ 0.44
PTPN18Q99952 AC091544.8-201ENST00000619490 361 ntBASIC17.83■□□□□ 0.44
PTPN18Q99952 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN18Q99952 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN18Q99952 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN18Q99952 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
PTPN18Q99952 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.83■□□□□ 0.44
PTPN18Q99952 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN18Q99952 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN18Q99952 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PTPN18Q99952 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN18Q99952 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN18Q99952 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
PTPN18Q99952 KRT8P4-201ENST00000509735 1454 ntBASIC17.82■□□□□ 0.44
PTPN18Q99952 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN18Q99952 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PTPN18Q99952 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN18Q99952 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PTPN18Q99952 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN18Q99952 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN18Q99952 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN18Q99952 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN18Q99952 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN18Q99952 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN18Q99952 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.82■□□□□ 0.44
PTPN18Q99952 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN18Q99952 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PTPN18Q99952 CHMP1AP1-201ENST00000445563 662 ntBASIC17.82■□□□□ 0.44
PTPN18Q99952 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN18Q99952 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms