Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
COL21A1Q96P44 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL21A1Q96P44 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
COL21A1Q96P44 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL21A1Q96P44 AC126755.1-201ENST00000525846 6405 ntBASIC15.03■□□□□ -0
COL21A1Q96P44 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
COL21A1Q96P44 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.03■□□□□ -0
COL21A1Q96P44 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL21A1Q96P44 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL21A1Q96P44 HLA-H-201ENST00000383620 1096 ntBASIC15.03■□□□□ -0
COL21A1Q96P44 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.03■□□□□ -0
COL21A1Q96P44 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.03■□□□□ -0
COL21A1Q96P44 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.03■□□□□ -0
COL21A1Q96P44 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
COL21A1Q96P44 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
COL21A1Q96P44 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.03■□□□□ -0
COL21A1Q96P44 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.03■□□□□ -0
COL21A1Q96P44 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
COL21A1Q96P44 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.03■□□□□ -0
COL21A1Q96P44 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
COL21A1Q96P44 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL21A1Q96P44 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.03■□□□□ -0
COL21A1Q96P44 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL21A1Q96P44 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL21A1Q96P44 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
COL21A1Q96P44 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL21A1Q96P44 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
COL21A1Q96P44 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.03■□□□□ -0
COL21A1Q96P44 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.02■□□□□ -0
COL21A1Q96P44 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
COL21A1Q96P44 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.02■□□□□ -0
COL21A1Q96P44 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.02■□□□□ -0
COL21A1Q96P44 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.02■□□□□ -0
COL21A1Q96P44 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.02■□□□□ -0
COL21A1Q96P44 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.02■□□□□ -0
COL21A1Q96P44 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.02■□□□□ -0
COL21A1Q96P44 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.02■□□□□ -0
COL21A1Q96P44 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.02■□□□□ -0
COL21A1Q96P44 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
COL21A1Q96P44 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL21A1Q96P44 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.02■□□□□ -0
COL21A1Q96P44 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.02■□□□□ -0
COL21A1Q96P44 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
COL21A1Q96P44 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.02■□□□□ -0
COL21A1Q96P44 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
COL21A1Q96P44 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
COL21A1Q96P44 RBPMS2P1-201ENST00000437762 623 ntBASIC15.02■□□□□ -0
COL21A1Q96P44 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.02■□□□□ -0
COL21A1Q96P44 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.02■□□□□ -0
COL21A1Q96P44 RNA5SP410-201ENST00000516285 106 ntBASIC15.02■□□□□ -0
COL21A1Q96P44 AC024267.1-201ENST00000582320 895 ntBASIC15.02■□□□□ -0
COL21A1Q96P44 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.02■□□□□ -0
COL21A1Q96P44 MIR4321-201ENST00000592276 80 ntBASIC15.02■□□□□ -0
COL21A1Q96P44 AC027612.4-201ENST00000605371 583 ntBASIC15.02■□□□□ -0
COL21A1Q96P44 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.02■□□□□ -0
COL21A1Q96P44 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.02■□□□□ -0
COL21A1Q96P44 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.02□□□□□ -0.01
COL21A1Q96P44 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.02□□□□□ -0.01
COL21A1Q96P44 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
COL21A1Q96P44 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL21A1Q96P44 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.02□□□□□ -0.01
COL21A1Q96P44 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.02□□□□□ -0.01
COL21A1Q96P44 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL21A1Q96P44 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL21A1Q96P44 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL21A1Q96P44 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL21A1Q96P44 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL21A1Q96P44 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.02□□□□□ -0.01
COL21A1Q96P44 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.02□□□□□ -0.01
COL21A1Q96P44 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL21A1Q96P44 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
COL21A1Q96P44 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 CICP13-201ENST00000422015 2789 ntBASIC15.01□□□□□ -0.01
COL21A1Q96P44 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 FAM220BP-201ENST00000377689 816 ntBASIC15.01□□□□□ -0.01
COL21A1Q96P44 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 ALG1L8P-201ENST00000533887 760 ntBASIC15.01□□□□□ -0.01
COL21A1Q96P44 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms