Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 AHCYP2-201ENST00000430630 1300 ntBASIC20.58■□□□□ 0.89
NBPF4Q96M43 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NBPF4Q96M43 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NBPF4Q96M43 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NBPF4Q96M43 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.58■□□□□ 0.89
NBPF4Q96M43 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NBPF4Q96M43 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NBPF4Q96M43 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NBPF4Q96M43 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NBPF4Q96M43 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NBPF4Q96M43 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NBPF4Q96M43 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC20.58■□□□□ 0.89
NBPF4Q96M43 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
NBPF4Q96M43 MIR1202-201ENST00000408529 83 ntBASIC20.58■□□□□ 0.89
NBPF4Q96M43 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC20.58■□□□□ 0.89
NBPF4Q96M43 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC20.58■□□□□ 0.89
NBPF4Q96M43 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC20.58■□□□□ 0.89
NBPF4Q96M43 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC20.58■□□□□ 0.89
NBPF4Q96M43 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NBPF4Q96M43 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NBPF4Q96M43 RNA5SP486-201ENST00000515961 83 ntBASIC20.58■□□□□ 0.89
NBPF4Q96M43 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NBPF4Q96M43 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC20.58■□□□□ 0.89
NBPF4Q96M43 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC20.58■□□□□ 0.89
NBPF4Q96M43 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.58■□□□□ 0.89
NBPF4Q96M43 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC20.58■□□□□ 0.89
NBPF4Q96M43 AC025181.2-201ENST00000606994 802 ntBASIC20.58■□□□□ 0.89
NBPF4Q96M43 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.58■□□□□ 0.89
NBPF4Q96M43 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NBPF4Q96M43 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NBPF4Q96M43 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NBPF4Q96M43 MTHFR-217ENST00000641820 1569 ntBASIC20.58■□□□□ 0.88
NBPF4Q96M43 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
NBPF4Q96M43 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
NBPF4Q96M43 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NBPF4Q96M43 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.58■□□□□ 0.88
NBPF4Q96M43 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NBPF4Q96M43 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.58■□□□□ 0.88
NBPF4Q96M43 AC022188.1-201ENST00000620960 1664 ntBASIC20.58■□□□□ 0.88
NBPF4Q96M43 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NBPF4Q96M43 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.57■□□□□ 0.88
NBPF4Q96M43 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 AGER-203ENST00000375065 665 ntTSL 2 BASIC20.57■□□□□ 0.88
NBPF4Q96M43 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC20.57■□□□□ 0.88
NBPF4Q96M43 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC20.57■□□□□ 0.88
NBPF4Q96M43 KLF2P2-201ENST00000416807 1039 ntBASIC20.57■□□□□ 0.88
NBPF4Q96M43 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC20.57■□□□□ 0.88
NBPF4Q96M43 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.57■□□□□ 0.88
NBPF4Q96M43 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
NBPF4Q96M43 AL591846.1-201ENST00000451736 433 ntBASIC20.57■□□□□ 0.88
NBPF4Q96M43 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NBPF4Q96M43 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.57■□□□□ 0.88
NBPF4Q96M43 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC20.57■□□□□ 0.88
NBPF4Q96M43 GPR39-203ENST00000622084 900 ntTSL 5 BASIC20.57■□□□□ 0.88
NBPF4Q96M43 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.57■□□□□ 0.88
NBPF4Q96M43 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.57■□□□□ 0.88
NBPF4Q96M43 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NBPF4Q96M43 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC20.56■□□□□ 0.88
NBPF4Q96M43 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NBPF4Q96M43 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NBPF4Q96M43 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NBPF4Q96M43 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NBPF4Q96M43 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NBPF4Q96M43 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC20.56■□□□□ 0.88
NBPF4Q96M43 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NBPF4Q96M43 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NBPF4Q96M43 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.56■□□□□ 0.88
NBPF4Q96M43 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NBPF4Q96M43 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NBPF4Q96M43 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NBPF4Q96M43 FOS-202ENST00000535987 1402 ntTSL 2 BASIC20.56■□□□□ 0.88
NBPF4Q96M43 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.56■□□□□ 0.88
NBPF4Q96M43 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NBPF4Q96M43 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NBPF4Q96M43 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NBPF4Q96M43 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NBPF4Q96M43 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NBPF4Q96M43 ACTBP8-201ENST00000403258 1108 ntBASIC20.56■□□□□ 0.88
NBPF4Q96M43 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NBPF4Q96M43 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NBPF4Q96M43 AC007969.1-201ENST00000433675 447 ntBASIC20.56■□□□□ 0.88
NBPF4Q96M43 AC104306.2-201ENST00000451877 341 ntBASIC20.56■□□□□ 0.88
NBPF4Q96M43 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC20.56■□□□□ 0.88
NBPF4Q96M43 KRT8P13-201ENST00000463294 1010 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms