Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC106886.1-201ENST00000568660 600 ntBASIC17.01■□□□□ 0.31
SNX27Q96L92 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.01■□□□□ 0.31
SNX27Q96L92 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX27Q96L92 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SNX27Q96L92 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SNX27Q96L92 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.01■□□□□ 0.31
SNX27Q96L92 AC000095.1-201ENST00000603208 874 ntBASIC17.01■□□□□ 0.31
SNX27Q96L92 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 IGHV3-72-202ENST00000621503 303 ntBASIC17.01■□□□□ 0.31
SNX27Q96L92 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SNX27Q96L92 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX27Q96L92 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
SNX27Q96L92 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SNX27Q96L92 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX27Q96L92 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SNX27Q96L92 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SNX27Q96L92 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX27Q96L92 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SNX27Q96L92 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SNX27Q96L92 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SNX27Q96L92 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SNX27Q96L92 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17■□□□□ 0.31
SNX27Q96L92 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
SNX27Q96L92 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17■□□□□ 0.31
SNX27Q96L92 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17■□□□□ 0.31
SNX27Q96L92 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17■□□□□ 0.31
SNX27Q96L92 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17■□□□□ 0.31
SNX27Q96L92 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17■□□□□ 0.31
SNX27Q96L92 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 BRI3BPP1-201ENST00000594224 787 ntBASIC17■□□□□ 0.31
SNX27Q96L92 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SNX27Q96L92 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
SNX27Q96L92 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17■□□□□ 0.31
SNX27Q96L92 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17■□□□□ 0.31
SNX27Q96L92 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17■□□□□ 0.31
SNX27Q96L92 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17■□□□□ 0.31
SNX27Q96L92 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SNX27Q96L92 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SNX27Q96L92 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 AC020907.1-201ENST00000616460 1350 ntBASIC17■□□□□ 0.31
SNX27Q96L92 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNX27Q96L92 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.99■□□□□ 0.31
SNX27Q96L92 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNX27Q96L92 AC026691.1-201ENST00000602502 2017 ntBASIC16.99■□□□□ 0.31
SNX27Q96L92 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
SNX27Q96L92 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNX27Q96L92 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SNX27Q96L92 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SNX27Q96L92 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNX27Q96L92 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNX27Q96L92 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNX27Q96L92 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.99■□□□□ 0.31
SNX27Q96L92 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNX27Q96L92 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SNX27Q96L92 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.99■□□□□ 0.31
SNX27Q96L92 AL512384.1-201ENST00000406683 331 ntBASIC16.99■□□□□ 0.31
SNX27Q96L92 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.99■□□□□ 0.31
SNX27Q96L92 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNX27Q96L92 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.99■□□□□ 0.31
SNX27Q96L92 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.99■□□□□ 0.31
SNX27Q96L92 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.99■□□□□ 0.31
SNX27Q96L92 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.99■□□□□ 0.31
SNX27Q96L92 AL442647.2-201ENST00000429864 857 ntBASIC16.99■□□□□ 0.31
SNX27Q96L92 ACTBP11-201ENST00000436287 1126 ntBASIC16.99■□□□□ 0.31
SNX27Q96L92 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.99■□□□□ 0.31
SNX27Q96L92 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.99■□□□□ 0.31
SNX27Q96L92 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.99■□□□□ 0.31
SNX27Q96L92 MPRIPP1-201ENST00000452433 1089 ntBASIC16.99■□□□□ 0.31
SNX27Q96L92 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.99■□□□□ 0.31
SNX27Q96L92 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.99■□□□□ 0.31
SNX27Q96L92 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.99■□□□□ 0.31
SNX27Q96L92 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.99■□□□□ 0.31
SNX27Q96L92 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms