Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 AC104692.2-201ENST00000603054 253 ntBASIC15.29■□□□□ 0.04
VPS33AQ96AX1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 AC007064.4-201ENST00000637740 555 ntBASIC15.28■□□□□ 0.04
VPS33AQ96AX1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.28■□□□□ 0.04
VPS33AQ96AX1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.27■□□□□ 0.04
VPS33AQ96AX1 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.27■□□□□ 0.04
VPS33AQ96AX1 AC025580.3-201ENST00000617932 1424 ntBASIC15.27■□□□□ 0.04
VPS33AQ96AX1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 MRPL3P1-201ENST00000400109 1033 ntBASIC15.27■□□□□ 0.04
VPS33AQ96AX1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.27■□□□□ 0.04
VPS33AQ96AX1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.27■□□□□ 0.03
VPS33AQ96AX1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VPS33AQ96AX1 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
VPS33AQ96AX1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.27■□□□□ 0.03
VPS33AQ96AX1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.27■□□□□ 0.03
VPS33AQ96AX1 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.27■□□□□ 0.03
VPS33AQ96AX1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VPS33AQ96AX1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VPS33AQ96AX1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VPS33AQ96AX1 SNX18-202ENST00000343017 3140 ntBASIC15.27■□□□□ 0.03
VPS33AQ96AX1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VPS33AQ96AX1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
VPS33AQ96AX1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms