Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 AC106730.1-201ENST00000566722 1090 ntBASIC17.91■□□□□ 0.46
SMARCE1Q969G3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 BX640515.1-201ENST00000617215 977 ntBASIC17.91■□□□□ 0.46
SMARCE1Q969G3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 FAM197Y3-203ENST00000618346 717 ntBASIC17.91■□□□□ 0.46
SMARCE1Q969G3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 REXO1L1P-202ENST00000608646 1974 ntBASIC17.9■□□□□ 0.46
SMARCE1Q969G3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 AC142381.1-201ENST00000426099 345 ntBASIC17.9■□□□□ 0.46
SMARCE1Q969G3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 FDX1P1-201ENST00000449115 551 ntBASIC17.9■□□□□ 0.46
SMARCE1Q969G3 RNA5SP410-201ENST00000516285 106 ntBASIC17.9■□□□□ 0.46
SMARCE1Q969G3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.9■□□□□ 0.46
SMARCE1Q969G3 AC120114.3-201ENST00000611923 658 ntBASIC17.9■□□□□ 0.46
SMARCE1Q969G3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SMARCE1Q969G3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SMARCE1Q969G3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
SMARCE1Q969G3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SMARCE1Q969G3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
SMARCE1Q969G3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 AC004987.2-201ENST00000395959 1148 ntBASIC17.89■□□□□ 0.45
SMARCE1Q969G3 FAM86C2P-203ENST00000528684 1004 ntBASIC17.89■□□□□ 0.45
SMARCE1Q969G3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMARCE1Q969G3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms