Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.74■□□□□ 0.27
ATP2A3Q93084 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
ATP2A3Q93084 DFFBP1-201ENST00000433250 979 ntBASIC16.74■□□□□ 0.27
ATP2A3Q93084 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.74■□□□□ 0.27
ATP2A3Q93084 KRT17P7-201ENST00000451704 1104 ntBASIC16.74■□□□□ 0.27
ATP2A3Q93084 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A3Q93084 AL512361.1-201ENST00000554200 418 ntBASIC16.74■□□□□ 0.27
ATP2A3Q93084 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.74■□□□□ 0.27
ATP2A3Q93084 AC104794.3-201ENST00000566840 1248 ntBASIC16.74■□□□□ 0.27
ATP2A3Q93084 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.74■□□□□ 0.27
ATP2A3Q93084 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.74■□□□□ 0.27
ATP2A3Q93084 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.74■□□□□ 0.27
ATP2A3Q93084 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
ATP2A3Q93084 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A3Q93084 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.74■□□□□ 0.27
ATP2A3Q93084 GGT3P-204ENST00000453783 1664 ntBASIC16.74■□□□□ 0.27
ATP2A3Q93084 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A3Q93084 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A3Q93084 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.74■□□□□ 0.27
ATP2A3Q93084 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ATP2A3Q93084 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.74■□□□□ 0.27
ATP2A3Q93084 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A3Q93084 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A3Q93084 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A3Q93084 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A3Q93084 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2A3Q93084 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.73■□□□□ 0.27
ATP2A3Q93084 PCGF3-213ENST00000620529 1899 ntBASIC16.73■□□□□ 0.27
ATP2A3Q93084 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ATP2A3Q93084 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
ATP2A3Q93084 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ATP2A3Q93084 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.73■□□□□ 0.27
ATP2A3Q93084 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
ATP2A3Q93084 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ATP2A3Q93084 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.73■□□□□ 0.27
ATP2A3Q93084 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 SPDYE17-201ENST00000412399 783 ntBASIC16.73■□□□□ 0.27
ATP2A3Q93084 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.73■□□□□ 0.27
ATP2A3Q93084 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.73■□□□□ 0.27
ATP2A3Q93084 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.73■□□□□ 0.27
ATP2A3Q93084 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
ATP2A3Q93084 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.73■□□□□ 0.27
ATP2A3Q93084 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.73■□□□□ 0.27
ATP2A3Q93084 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 AL391825.1-201ENST00000457671 1364 ntBASIC16.73■□□□□ 0.27
ATP2A3Q93084 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.73■□□□□ 0.27
ATP2A3Q93084 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ATP2A3Q93084 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2A3Q93084 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.73■□□□□ 0.27
ATP2A3Q93084 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ATP2A3Q93084 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.72■□□□□ 0.27
ATP2A3Q93084 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
ATP2A3Q93084 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 AL596087.1-201ENST00000400979 1969 ntBASIC16.72■□□□□ 0.27
ATP2A3Q93084 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 AC087499.6-201ENST00000411576 835 ntBASIC16.72■□□□□ 0.27
ATP2A3Q93084 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.72■□□□□ 0.27
ATP2A3Q93084 AL139010.1-201ENST00000454878 894 ntBASIC16.72■□□□□ 0.27
ATP2A3Q93084 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.72■□□□□ 0.27
ATP2A3Q93084 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.72■□□□□ 0.27
ATP2A3Q93084 API5-211ENST00000534695 560 ntTSL 5 BASIC16.72■□□□□ 0.27
ATP2A3Q93084 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.72■□□□□ 0.27
ATP2A3Q93084 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A3Q93084 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.72■□□□□ 0.27
ATP2A3Q93084 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.72■□□□□ 0.27
ATP2A3Q93084 AL033527.5-202ENST00000641632 1098 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms